Detailed information on CNT30639890


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200773Nymphaea colorataPisum sativum77.0961.7496.361814forward
CNT30326143Nymphaea colorataAsparagus officinalis77.1458.9396.641815forward

Expression of CNT30639890

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMRRRHEGRAIRRVIMNHQNIEQSPHWPFI*

>peptide 2 (44 aa)
MRPFQKSGCGARISSSFTTVIRVANTIKQTITDLMSHSQFHSLN*

>peptide 3 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPLNHYSDPEGQHNRTEIL*

>peptide 4 (37 aa)
MRMGCVNVLNKTAFHQSGSNTETKRRGKTNLASTTPI*

>peptide 5 (39 aa)
MTPMGDAANATHAPRHQALPNGRLHAGIAMRTSGTWEAHN

>peptide 6 (45 aa)
MANQNSHDADGRRSQRHSCAKTSGASQRSPSRRHSHADKRNLGGA*

>peptide 7 (49 aa)
MNFSRRRRQRTASVAAIRTLHRTIQSVGATGGVYKGQGRSQRELMTHAY*

>peptide 8 (32 aa)
MKYECPRLSLLIITPIPKANTIGPKSCDVIPC*

>peptide 9 (32 aa)
PVYPIGNNNDPSAGSPTETLLRLLLPLNDKVQ*

Sequence

>CNT30639890
GCCGGTCTATCCAATAGGAAACAACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAATGA
ACTTCTCGCGACGTCGTAGGCAGCGAACCGCCTCCGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAA
AGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCACGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGTAG
TTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC
CTGTTATTGCCTCAAACTTCCATGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGGTACCTCCACGTAGCTAGTTAGCAGGCTGAGGT
CTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAA
TCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTT
CAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCCGATCCCTAGTCGGCA
TCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTG
TTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTCTTAATCATTACTCCGATCCCGAAGGCCAACACA
ATAGGACCGAAATCCTGTGATGTTATCCCATGCTAATGTATGCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCACCGGAGGCA
CGACCCGGCCAGTTAAGGCCAGGAGCGCATCGCCGGTAGAAGGGACGAGACAACCGGTGCACACCCAGAGGCGGACCGGTCGGCCCAACCCAAAATCCAA
CTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAA
GGGGTTTAGATTGTACTCATTCCAATTACCAGACTCGAAGAGCCCGGTATTGTTATGTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCG
CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACTACCATGGTAGGCCACTAT
CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCACCAAAACATCGAG
CAAAGCCCGCATTGGCCTTTTATCTAATAAATGCGACCCTTCCAAAAGTCGGGGTGTGGTGCACGTATTAGCTCTAGCTTTACTACGGTTATCCGAGTAG
CAAATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGA
CAAGCATATGACTACTGGCAGGATCAACCAGGTAGCAACACATCGACAACGTCAGAGGCCCCGGCCACAAAAGAACCGATAGCTACCGACGGTCAATCAT
CGTTTCGTTTTTGACATCACTGCGGACGACGTTTTAGGAAGAACAGCATTAAAAAACTGCCCACCGGCGCCCGAAACGTACTGAGAATCCATAAAGCCGA
CGTAACGACAGAAATAACCAACGATCAGCACAAAAGCTGAGAGGCCAAAAGCCGCACGCCCAAGCCCTCCGCACACCATGCGGATGGGCTGCGTTAATGT
CCTTAACAAGACGGCGTTCCACCAAAGCGGCAGCAATACAGAGACCAAACGTAGGGGCAAAACAAACTTAGCGTCAACCACACCAATATAACAAGCACAT
CACCCAAACGGTTCATGGCAAACCAAAACAGCCATGACGCCGATGGGAGACGCAGCCAACGCCACTCATGCGCCAAGACATCAGGCGCTTCCCAACGGTC
GCCTTCACGCCGGCATAGCCATGCGGACAAGCGGAACTTGGGAGGCGCATAAT