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Detailed information on CNT30639835


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550163Nymphaea colorataIpomoea triloba49.7982.4395.081666reverse complement
CNT30519180Nymphaea colorataJuglans regia77.6478.5693.342598reverse complement
CNT3021656Nymphaea colorataCitrullus lanatus75.6141.7994.272530reverse complement
CNT30508033Nymphaea colorataNicotiana attenuata75.1375.592.62514reverse complement
CNT3047210Nymphaea colorataPrunus dulcis76.2479.391.962551reverse complement
CNT30383013Nymphaea colorataTriticum turgidum75.5595.2591.182528reverse complement
CNT3076930Nymphaea colorataBrassica juncea75.9173.9292.992540reverse complement
CNT30433917Nymphaea colorataPapaver somniferum76.8194.2893.232570reverse complement
CNT3037170Nymphaea colorataCucumis melo75.5553.5193.992528reverse complement

Expression of CNT30639835

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSDSLVRVSRRAGWGARWPVPWARRHCKQSAT*

>peptide 2 (37 aa)
MLPLEPFSKDRGRSAVQNPKRASCHSVSLRLPGFHTC*

>peptide 3 (66 aa)
LPLTIPRRVFKSSAKDSAHHPIEIALQGYSHGSSARVRNHQRHKPLGSTRPLLRVGKRVAGESTAS*

>peptide 4 (79 aa)
MPGEGPVKGHSQSVPRPARSGPLSPQEQLEQSADSRRVLDKDPRAQPSEPILFPKLRIRFADFPCLHCSIGQRLFTLET*

>peptide 5 (82 aa)
MCRPSQTPHLTMSSARIGLHEANLGTKRRGSAPPPTNGISKITLKVVVFHFRRLNGSHLSYTSQVISQSRTRVKLNRVFFPR*

>peptide 6 (86 aa)
MGSPLAGAMGTQALQAVRHIGAHRISSATTTTFLERDQPPGLQPPLRPAPNHASSRAPDRPQAVPHTTEANRRPPSASLPAISSTF*

>peptide 7 (37 aa)
MAHLELLIPRPGSTKQPCRPTYLKFENRSRAVRPRCL*

>peptide 8 (38 aa)
MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKF*

>peptide 9 (53 aa)
MSTTERGRHSVLRIFKGRRGRIGHHATCGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 10 (59 aa)
MRQGPGTTGLSPSPAPCSRGLGPSPSLRTLLQTTIRKAKPTDFHSGLFPVRSPLLRESW*

>peptide 11 (86 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPFRPALRPGFRNDRRALLLIEAWQLPRRPSLGRALKRHPFSGLVDSAGELLHTP*

Sequence

>CNT30639835
CTGCCACTTACAATACCTCGTCGCGTATTTAAGTCGTCTGCAAAGGATTCAGCCCACCATCCGATAGAAATTGCACTTCAAGGCTACTCACACGGCTCAT
CCGCCCGTGTGAGAAATCACCAACGGCACAAGCCCTTGGGGAGCACAAGGCCCCTACTGCGGGTCGGCAAACGGGTGGCGGGAGAGAGCACCGCTTCTTA
GCTTGGATTCTGACTTAGAGGCGTTCAGTCATAATCCGACACACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATTGCCAATTGTGTGAACCA
ACGGTTCCTCTCGTACTAAGTTGGATTACTATCACGGTGCAATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC
TATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTT
GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCTGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCG
TATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTT
TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCTGCACGAGGCAAACCTTGGAACCAAAAGGAGGGGCAGT
GCCCCGCCTCCGACTAACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGCCTAAACGGCTCCCACTTATCCTACACCTCTCAAG
TCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA
GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT
TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCCGCAAGGACCATCGCAATGCTTTGTTT
TAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGGCTGTTCGATGCCCGGGGAAGGCCCCGTGAAGGGCCATTCCCAGTCTGTCCCCCG
GCCGGCACGCAGTGGCCCGCTCTCGCCGCAAGAGCAGCTCGAGCAGTCCGCCGACAGCCGACGGGTTCTGGACAAGGACCCCCGTGCCCAGCCCTCAGAG
CCAATCCTTTTCCCGAAGTTACGGATCCGTTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTT
ATGAGTACGACCGAGCGTGGGCGGCATTCGGTCCTCCGGATTTTCAAGGGTCGCCGAGGGCGCATCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCG
CTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCTCGCCAACGTGTCCGGACTCCCT
AACGTTGCCGTCAACCGCCACGTCCCGGTTCGGGAATTTTAACCCGATTCCCTTTCGAGGCTCGCGCAATAAGCGCTATCCGACGGGCTTCCCCTGCCTC
TTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGA
TCTGCACCGACGGCCGTTCCGCCCAGCCTTGCGGCCCGGGTTTCGCAACGACCGCCGCGCCCTCCTACTCATCGAGGCATGGCAATTGCCCCGACGGCCA
AGTTTAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCA
CCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTAGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGT
TCTGCTTACCAAAAATGGCCCACTTGGAGCTCTTGATTCCGCGACCTGGCTCAACAAAGCAGCCATGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTC
GAGGGCGGTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCTCGCGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTA
CTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTC
ACCTCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCCCACTCGAACCCTTCTCAAAAGATCGAGGTCGGTCGGCAGTGCAAAACCC
GAAAAGGGCATCCTGCCATTCAGTTTCCTTGCGCCTTCCAGGTTTCCACACCTGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGG
GCCGGATGGGGAGCCCGCTGGCCGGTGCCATGGGCACGCAGGCACTGCAAGCAGTCCGCCACATAGGCGCGCACCGCATCTCCTCGGCCACAACGACAAC
GTTCCTCGAACGGGATCAACCGCCCGGGCTTCAGCCGCCGTTGCGGCCGGCACCGAACCACGCCTCGAGCCGAGCGCCGGACCGGCCACAAGCCGTTCCG
CATACGACCGAGGCGAATCGCCGGCCCCCATCCGCTTCCCTCCCGGCAATTTCAAGCACTTTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCG
CGGTACTTGTTCGCTATCGGTCTCCCGCCTATATTTAGCCTTGGACGGAATTTACCGCCCGATTAGGGCTGCATTCCCAAACAACCCGACTCGTTGACAG
CGCCTCGTGATGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCTGTTCCAGGGGACTTGGGCCCAGTCCGTCGCTGAGGACGCTTC
TACAGACTACAATTCGGAAGGCTAAGCCTACCGATTTTCATTCTGGGCTGTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTGGTAAGTTTCTTTTCC
TCCGCTTATTGATATGCTTAAACTCAGCGGGTAATCTCGCCTGACC