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Detailed information on CNT30639803


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670613Nymphaea colorataSetaria viridis23.4232.4783.33126forward
CNT30515079Nymphaea colorataJuglans regia26.2127.5481.56141forward
CNT30302990Nymphaea colorataTriticum aestivum22.342.2583.33120forward
CNT309074Nymphaea colorataZea mays18.434.3883.8499forward

Expression of CNT30639803

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MEPMSSISTAVSDQRLDHCSKSLSTKLFLTGLNTKIIRGDQRSRGQGSSTRF*

>peptide 2 (58 aa)
RKPKEKYRKQLVTVKRPVQSQTSCELHGTHEFHLDGSLGSKARPLLKKSVHQTLSYRT*

>peptide 3 (32 aa)
MTIQHQRASRSHLPSSSSQLEASLSTCWPEKI*

Sequence

>CNT30639803
CAGAAAACCAAAAGAAAAATATAGAAAGCAACTCGTCACAGTAAAGCGGCCAGTCCAGAGCCAGACATCGTGTGAACTACATGGAACCCATGAGTTCCAT
CTCGACGGCAGTCTCGGATCAAAGGCTAGACCACTGCTCAAAAAGTCTGTCCACCAAACTCTTTCTTACAGGACTTAATACAAAGATTATTCGAGGTGAC
CAGAGGTCGAGAGGTCAAGGTTCTTCGACAAGGTTCTGACAATCATAGTCGCACTACACACAATTCCTACACGGAAATAGAATAATACAAGCTAGCATAG
AACCCAGAAGGGAAATTTGTTATGCAAGCCCTAAGGGCTGTGGTTTAAGCCTTAGAGTCGTTGCTGCAGTCACCCACCCTGTTACTGCACGGACCCAAAC
AGATGACCATCCAACATCAACGAGCTTCCCGCTCTCACCTACCGAGCTCGTCCAGCCAGTTAGAAGCATCGCTGAGTACATGCTGGCCAGAGAAAATATA
AGATGGAAGAAGGAGTACGAATACGTGACTGGACGTGC