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Detailed information on CNT30639595


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01781|SAHH_PETCR, E-value = 4e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671211Nymphaea colorataSetaria viridis28.3963.5184.33134forward
CNT30628366Nymphaea colorataVigna unguiculata54.0317.8481.96255forward
CNT3096327Nymphaea colorataSolanum tuberosum30.7218.2480145forward
CNT30221157Nymphaea colorataHordeum vulgare14.4132.3897.0668forward
CNT30587418Nymphaea colorataMusa acuminata31.5719.6386.58149forward
CNT3084173Nymphaea colorataVigna radiata29.0319.6881.02137forward
CNT30511017Nymphaea colorataSolanum lycopersicum30.7224.3380.69145forward
CNT30144739Nymphaea colorataMedicago truncatula22.2522.6390.48105forward
CNT30659902Nymphaea colorataTriticum dicoccoides15.4723.789.0473forward
CNT30312478Nymphaea colorataCamelina sativa10.5920.499450forward
CNT30611972Nymphaea colorataArabis alpina18.8637.3986.5289forward
CNT30720265Nymphaea colorataTriticum spelta14.6225.3788.4169forward
CNT30365573Nymphaea colorataSorghum bicolor28.8138.5387.5136forward
CNT30354796Nymphaea colorataLactuca sativa43.4338.9781.46205forward
CNT30570586Nymphaea colorataVitis vinifera78.8153.9182.26372forward
CNT30329937Nymphaea colorataDioscorea rotundata44.9220.4683.02212forward
CNT30103950Nymphaea colorataOryza rufipogon53.673.9886.96253forward
CNT3065844Nymphaea colorataSelaginella moellendorffii19.2826.0790.1191forward

Expression of CNT30639595

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MGSVLRPSRMRVSTIWNSWFVVDAGSGSLPDLAYSSSALTPSWMRSVASPPSSTMRSGPPPGPQSSARSVHHQYSWRVSPFQANTAALSRAMAAAAWS*

Sequence

>CNT30639595
GTTGGCCTGCATTTGGTAGAGCCGCTTGACACCGGTGGTGGTCTCCTCTGAGACACCAACCAGCCTCTCCTTCATCTTGTGGTACTTCATGGGATCGGTC
TTAAGGCCATCGCGGATGAGGGTGAGCACGATCTGGAACTCCTGGTTCGTGGTGGATGCGGGGTCCGGGAGCTTGCCCGACTTGGCGTACTCCTCCTCGG
CCTTGACACCCTCGTGGATGAGGAGCGTGGCGTCGCCGCCGTCGTCGACGATGAGGTCAGGGCCACCGCCAGGGCCCCAGTCGAGTGCGCGCTCGGTGCA
CCACCAGTACTCCTGGAGGGTCTCCCCCTTCCAGGCGAACACGGCGGCGCTGTCCCGGGCGATGGCCGCGGCGGCGTGGTCCTGAGTGGAGAAGATGTTG
CCGGGCATCTCCACCTCGGCGAGTTCGATCTCCAGGCGACCGAAGTCGGCCTGGGACATGTCCTTCACCTTG