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Detailed information on CNT30639585


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677202Nymphaea colorataSetaria viridis30.4217.4684.9373forward
CNT30524374Nymphaea colorataSetaria italica409.7283.3396forward
CNT30374484Nymphaea colorataArabidopsis thaliana20.8311.769050forward
CNT30538163Nymphaea colorataBrassica napus32.0815.6284.4277forward
CNT30237226Nymphaea colorataBrassica oleracea32.9217.4484.8179forward
CNT30439071Nymphaea colorataAegilops tauschii39.1728.1484.0494forward
CNT30664005Nymphaea colorataTriticum dicoccoides38.7520.983.8793forward
CNT307142Nymphaea colorataZea mays41.677.9984100forward
CNT30345072Nymphaea colorataEragrostis tef42.0821.5886.14101forward
CNT30582099Nymphaea colorataEchinochloa crusgalli21.259.4690.251forward
CNT30334895Nymphaea colorataCynara cardunculus41.6724.5785100forward

Expression of CNT30639585

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LHHEYLIITRQDKRKGNCVKSCNCKRQTAKPTPHSISIM*

>peptide 2 (34 aa)
MGQVFWRALAYEKETCHGFEPWFMAFRLRVASTSD

Sequence

>CNT30639585
GCCTACATCATGAGTATTTAATCATTACAAGGCAGGACAAGAGGAAAGGAAATTGTGTGAAATCCTGCAACTGTAAGAGGCAAACAGCAAAACCTACTCC
ACACAGTATTAGTATTATGTAGGAACGGAGAAAGTATGGGGCAAGTGTTCTGGAGAGCTCTCGCATATGAGAAGGAGACGTGCCATGGGTTCGAGCCCTG
GTTCATGGCGTTCAGGTTGAGGGTAGCCTCCACTTCAGAT