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Detailed information on CNT30639567


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XT99|AKR2_ORYSJ, E-value = 1e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316651Nymphaea colorataCorylus avellana23.1231.381.17154forward
CNT3070513Nymphaea colorataQuercus suber23.4222.9179.49156forward
CNT30146672Nymphaea colorataMedicago truncatula14.7141.3582.6598forward
CNT30152051Nymphaea colorataPrunus persica23.4219.8780.13156forward
CNT30120862Nymphaea colorataCitrus clementina17.8721.8882.35119forward

Expression of CNT30639567

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MLKFCHFFRGQGHRQSTNILIQIFNFGGSRNRANIFPLMMNPSQCKLGWCASLLSSYFMYTFKQIGIMLQILWLKSWQE

>peptide 2 (79 aa)
LRTKPSVHHFIIVMQQKHCLQQKEDTTVFPNILKHSTSKPLSIIRGNYNSFPQYTQYIPHNESQCFLYLYLHELIFTTL*

>peptide 3 (34 aa)
MSAYLSPLTPSLEAICSSSAISSEVRVTDKAPIF*

>peptide 4 (59 aa)
KNKTISTSFYYRNATKALSTTKGRYNSISQYTKAFNIKTVVYNKRKLQQFSPVYSIHST*

>peptide 5 (40 aa)
MHQRIVQQPLWSKITRLSMRTKQVSLMQKKWDACLRTCLP*

Sequence

>CNT30639567
TTAAGAACAAAACCATCAGTACATCATTTTATTATCGTAATGCAACAAAAGCATTGTCTACAACAAAAGGAAGATACAACAGTATTTCCCAATATACTAA
AGCATTCAACATCAAAACCGTTGTCTATAATAAGAGGAAATTACAACAGTTTTCCCCAGTATACTCAATACATTCCACATAATGAGTCACAGTGCTTTCT
TTATTTATACCTCCACGAACTCATTTTCACCACACTTTAAGTACCATATTTTGCTTTATTAAAGTATTAAAATAGTCTTCAGATCATGCACCAAAGGATA
GTTCAACAGCCACTTTGGAGTAAGATTACTCGGCTTTCCATGAGGACAAAGCAGGTGTCTCTGATGCAAAAAAAGTGGGACGCATGTCTGCGTACCTGTC
TCCCTTAACGCCATCCTTGGAAGCTATATGCTCAAGTTCTGCCATTTCTTCAGAGGTCAGGGTCACAGACAAAGCACCAATATTCTGATTCAGATTTTCA
ATTTTGGTGGTTCCAGGAATCGAGCAAACATCTTTCCCCTGATGATGAACCCAAGCCAATGCAAGCTGGGATGGTGTGCATCCCTTCTTAGTAGCTATTT
CATGTACACGTTCAAACAGATTGGCATTATGTTGCAAATTCTCTGGCTGAAATCTTGGCAAGAACT