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Detailed information on CNT30639555


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Nymphaea colorataOryza sativa54.6836.4895.4934forward
CNT30524664Nymphaea colorataSetaria italica53.9867.3594.14922forward
CNT30536068Nymphaea colorataEucalyptus grandis89.8744.5795.371535reverse complement
CNT30513456Nymphaea colorataJuglans regia89.9948.4296.291537forward
CNT30378667Nymphaea colorataArabidopsis thaliana17.1526.1896.59293forward
CNT30500477Nymphaea colorataCoffea canephora82.3277.2196.371406forward
CNT30616920Nymphaea colorataSesamum indicum30.9754.1588.85529reverse complement
CNT30269781Nymphaea colorataChenopodium quinoa89.5851.7894.441530forward
CNT30730500Nymphaea colorataCorchorus capsularis61.5388.5496.961051forward
CNT30630109Nymphaea colorataVigna unguiculata90.5749.0895.411547forward
CNT30196858Nymphaea colorataPisum sativum87.1280.1393.951488forward
CNT30503447Nymphaea colorataNicotiana attenuata66.6368.0297.011138reverse complement
CNT30638683Nymphaea colorataCapsicum annuum29.5197.6792.26504reverse complement
CNT3090649Nymphaea colorataSolanum tuberosum89.8756.1496.811535forward
CNT30193801Nymphaea colorataSecale cereale79.896.5395.081363forward
CNT30291213Nymphaea colorataTriticum aestivum85.8342.295.231466forward
CNT30225309Nymphaea colorataHordeum vulgare47.4267.2291.11810forward
CNT30400299Nymphaea colorataTriticum turgidum54.6843.7995.18934forward
CNT30588765Nymphaea colorataMusa acuminata35.0785.8296.83599reverse complement
CNT3088853Nymphaea colorataVigna radiata15.9367.1695.96272reverse complement
CNT30511396Nymphaea colorataSolanum lycopersicum35.4866.2392.74606forward
CNT30441975Nymphaea colorataAegilops tauschii36.3677.9294.52621forward
CNT30248027Nymphaea colorataAvena sativa56.3898.8793.15963reverse complement
CNT30664460Nymphaea colorataTriticum dicoccoides21.25100.2895.59363forward
CNT30310298Nymphaea colorataCamelina sativa54.0460.5297.18923reverse complement
CNT3062651Nymphaea colorataArabidopsis lyrata40.3482.8196.81689reverse complement
CNT30266045Nymphaea colorataBrassica rapa19.3274.4993.33330forward
CNT30460907Nymphaea colorataSaccharum spontaneum89.9346.195.441536forward
CNT30136065Nymphaea colorataLolium perenne28.7576.4894.7491forward
CNT3017045Nymphaea colorataZea mays89.9356.9794.61536reverse complement
CNT30655263Nymphaea colorataRosa chinensis87.382.693.91491forward
CNT30206293Nymphaea colorataHelianthus annuus83.4964.9197.481426forward
CNT30126841Nymphaea colorataCorymbia citriodora20.4994.0993.14350forward
CNT30713553Nymphaea colorataMalus domestica golden24.7162.6197.87422forward
CNT30627950Nymphaea colorataDaucus carota16.5165.5896.45282forward
CNT30688464Nymphaea colorataTriticum urartu89.9983.5395.321537forward
CNT30720907Nymphaea colorataTriticum spelta60.07100.4994.641026reverse complement
CNT30364730Nymphaea colorataSorghum bicolor21.6665.2694.05370reverse complement
CNT30596725Nymphaea colorataOryza meridionalis87.0643.0995.431487forward
CNT30154922Nymphaea colorataPrunus persica85.7786.7493.581465reverse complement
CNT30410430Nymphaea colorataPapaver somniferum80.0947.29971368reverse complement
CNT30646402Nymphaea colorataCannabis sativa63.8286.1791.561090reverse complement
CNT30319706Nymphaea colorataAsparagus officinalis88.2952.4798.211508forward
CNT30332807Nymphaea colorataDioscorea rotundata77.6380.2797.961326reverse complement
CNT30148090Nymphaea colorataBrachypodium distachyon77.6945.6895.331327reverse complement
CNT30103033Nymphaea colorataOryza rufipogon84.6693.2393.711446reverse complement
CNT30585638Nymphaea colorataEchinochloa crusgalli30.4433.5995.38520reverse complement
CNT30604668Nymphaea colorataOryza punctata18.7472.8994.06320forward

Expression of CNT30639555

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDPKTK*

>peptide 2 (89 aa)
SSTLGWHSLNVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP*

Sequence

>CNT30639555
AGCAGCACCTTAGGATGGCATAGCCTTAACGTTAACGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCG
TAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACCTTTCGAACTGCTGCTGAATCCATGGGCAGG
CAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAA
CCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTACTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAG
CATCACTGGCTTACGCTCTGACCCGAGTAGCATGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCG
ATAGCGAAGTAGTACCGTGAGGAAAGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATTGG
ATCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCATAGCGAAAGCGAGTCTTCATA
GGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTT
GAAGAATCAGCGGATGAGTTGTGGTTAGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGA
CATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCCAAAACAAAATAACAGG
GGTCAAGGTCGGCCAGTGAGACGATGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA
AAGGAGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAG
ATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGATGTCAAAATGCATCGGTAGGGAGCGTTCCGCCTTAGAGTGAAGCACCCGCGCGAGCAGGTGTGGA
CGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAG
GGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTGGTCCCGAGGGACGGAGGAGGCT
AGGTTAGCCGAAAGATGGTTATCGGGTAGAGGAAATGCCTCGAGCCAATGTCCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAG
GAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAA
GGAACTCG