« Back to Nymphaea colorata search


Detailed information on CNT30639531


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30604398Nymphaea colorataOryza punctata20.463.7683.1589forward

Expression of CNT30639531

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MAQCEALLLYNKEAFKCGGRRRRCGRSPRPWPLPLSARIDGTQLLQPLLAGLMPVPVMGMVAI*

Sequence

>CNT30639531
AAAGAATACATGATACAGAAAGATGACAGCACACAAGAGTACAGAGAATGATTAGAAACAAAACTATTCGCAAACTGTCTTCATGAACACTCCAGTAAGA
CAGGGAACCACGCTAAAATCATACAAGGACAATAATTAACAACAACCCAATAAAGAAGGAGAAGCAGGAGCGGTGTATATGTGAAAAAAAAATCAATAGC
AAATGGCTCAGTGTGAAGCCCTCCTGCTGTATAATAAAGAGGCTTTTAAATGTGGCGGCCGCCGCCGCCGCTGCGGAAGGAGCCCAAGGCCTTGGCCGCT
GCCGCTCTCAGCACGTATTGATGGTACGCAGCTGCTGCAGCCGCTCCTGGCCGGGTTGATGCCCGTTCCGGTGATGGGGATGGTGGCGATATGAACCATA
AACACTGCAAAGCCGATTGGCAATGGCGCCAGGAC