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Detailed information on CNT30639395


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697485Nymphaea colorataOryza sativa23.8212.3686.8476forward

Expression of CNT30639395

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MIRWILVILSAEESGDELEEKLRPALPAAGESHLGSSPRQDSGHLSYYTLSLFLPRSPFL

>peptide 2 (44 aa)
MSSRRSSARRCRRPERATSAAVLDRIPAISPTTLSLSFSLALPFS

>peptide 3 (61 aa)
DVRLAETSGGHGVAGDEAGAEAGLLDDGGGERVVATGEENDALVVDDPLDSGDPFRRRVGG*

Sequence

>CNT30639395
CGATGTCCGGCTTGCCGAGACGAGCGGCGGACACGGAGTAGCCGGAGATGAAGCCGGCGCTGAAGCCGGTCTTCTGGACGATGGAGGCGGAGAGCGCGTC
GTAGCAACCGGGGAGGAGAACGACGCCCTCGTCGTCGATGATCCGCTGGATTCTGGTGATCCTTTCCGCCGAAGAGTCGGGGGATGAGCTCGAGGAGAAG
CTCCGCCCGGCGTTGCCGGCGGCCGGAGAGAGCCACCTCGGCAGCAGTCCTCGACAGGATTCCGGCCATCTCTCCTACTACACTCTCTCTCTCTTTCTCC
CTCGCTCTCCCTTTCTCTC