« Back to Capsicum annuum search


Detailed information on CNT30639077


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500634Capsicum annuumCoffea canephora57.1583.9995.18955forward
CNT30619307Capsicum annuumSesamum indicum60.860.6696.951016forward
CNT30283076Capsicum annuumChenopodium quinoa60.7474.0995.171015forward
CNT3091928Capsicum annuumSolanum tuberosum46.0899.7498.57770reverse complement
CNT30544087Capsicum annuumBrassica napus60.6865.7694.281014forward
CNT30311563Capsicum annuumCamelina sativa60.865.6394.691016forward
CNT30212627Capsicum annuumHelianthus annuus58.1795.4895.99972forward
CNT30719706Capsicum annuumMalus domestica golden60.2686.8996.031007forward
CNT30356344Capsicum annuumLactuca sativa60.6844.1892.51014forward
CNT30120738Capsicum annuumCitrus clementina51.1198.8495.78854forward
CNT30336076Capsicum annuumCynara cardunculus59.6135.4694.08996forward

Expression of CNT30639077

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MINRDSRAKGTGLAESAGKEDPVELDSSPTL*

>peptide 2 (69 aa)
MRPPSACRPAVGASAPKGTCRWLSRRGGRVAAAALKYNFHRAAGRILCRRLKYATGYCKWQSGLAATIH*

>peptide 3 (32 aa)
IRVRFRRGSLRNGYHIQGRQQARKLPNPDTGR*

>peptide 4 (29 aa)
MVCTGRLVPSVGDALLALTGRVVPPALLL*

Sequence

>CNT30639077
GAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGTTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTA
GTGACAATAAATAACAATACCGGGCTCAATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGC
CAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCNCCGGGCTCAATGAGTCTAGTAATTGGAATGAGCACAA
TCTAAATCCCTTAATGAGGATCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAA
AAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCTATGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAACTG
GCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTT
CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCT
GTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTA
TTTTACTTATTCCGTGAATCGGAAGCGGGGCACCGCCCCTCTTTTTGGACCCAAGGCTCGCTCTGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGG
GAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGC
TCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTT
ACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCA
CCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATA
GTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATG
ACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGCGCCCGCCGTCCGCTTGCCGACCCGCAGTAGGGGCCTCGGCCCCCAAGGGCACGTG
TCGTTGGCTAAGCCGCCGCGGCGGAAGGGTCGCGGCGGCCGCCTTGAAGTACAATTTCCATCGAGCGGCGGGCAGAATCCTTTGCAGACGACTTAAATAC
GCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTGTCGCTC