Detailed information on CNT30639039


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099349Capsicum annuumSolanum tuberosum68.1555.7585.91291forward

Expression of CNT30639039

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MHAQHRPQRPAIDAVRCCPCGRCKAEASPA

>peptide 2 (50 aa)
PHARCVYRIRESRPPLTDHDIARRSEGGVGREGGLSIRPAHEMRGAKGGR*

>peptide 3 (53 aa)
GPMPAASTASENPDRRSRTTTSHDEAREAWDARAAFRFAPRTKCEGRKAVDKT*

>peptide 4 (78 aa)
APCPLRLPHPRIPTAAHGPRHRTTKRGRRGTRGRPFDSPRARNARGERRSIKLDNAWALGMQHRKPTSSKPALRLPRD*

Sequence

>CNT30639039
GGCCCCATGCCCGCTGCGTCTACCGCATCCGAGAATCCCGACCGCCGCTCACGGACCACGACATCGCACGACGAAGCGAGGGAGGCGTGGGACGCGAGGG
CGGCCTTTCGATTCGCCCCGCGCACGAAATGCGAGGGGCGAAAGGCGGTCGATAAAACTTGATAATGCCTGGGCATTAGGTATGCAGCACAGGAAACCGA
CTTCGAGCAAGCCTGCATTGCGCTTGCCCCGCGACTGAGATGGCAGGCGGGTCAGGACGTCGCTGCTCGAGCAGGGATCCAACCTAACCGCACGTGCCGA
ACACAACTCACGCGCCGTGCGTCCAAATGCTCCGTCGATGCACGCCCAGCACCGGCCCCAACGCCCGGCAATAGATGCCGTGCGCTGCTGCCCGTGCGGA
CGTTGCAAGGCCGAAGCAAGTCCCGCT