Detailed information on CNT30639035


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698389Capsicum annuumQuercus lobata76.0964.0892.46942reverse complement
CNT30500372Capsicum annuumCoffea canephora71.5782.8893.12886forward
CNT30283133Capsicum annuumChenopodium quinoa56.4685.2491.13699forward
CNT30730459Capsicum annuumCorchorus capsularis88.2992.3194.241093forward
CNT30507879Capsicum annuumNicotiana attenuata86.5972.5397.671072forward
CNT3089447Capsicum annuumVigna radiata66.3277.0288.43821forward

Expression of CNT30639035

Peptides detected in this lncRNA

>peptide 1 (56 aa)
RGWPKCESTSTDVAASGGCNSTLFVVAATARRAFGLQDPFALRRSDRDPRSGGITR*

>peptide 2 (95 aa)
MGAGDAPRSDVERRRAGPPIDSGRGPAWIGGAAKARALDTLVERRLLDCGRQRAPPACFGICALRTLACGLPIRPVLKHGPRSLTCVRVNGRVNP*

>peptide 3 (72 aa)
MRPGRMWNGDEPVRRSTRGVDQRGLGGRPKPGLSIRSWNAVSSIVAGSARLRRASASARSGRWPVGSPFDPS*

>peptide 4 (73 aa)
AAGLNASPRRRTSRQVVVVTQLSLSSRLRPVARSDSRTPSRSGAPTATPGQAGLPAEFKHINKRRKRNLQGFP*

>peptide 5 (52 aa)
MCASQRASKPVRRKEADWWDPPEGCTADRPRSSEKGSSVSIPVGTRKMVNYA*

>peptide 6 (40 aa)
MQPKSGGEFRPRLNTGERPIANKYREGKMKRTLKRESKSA*

Sequence

>CNT30639035
TCGCGGCTGGCCTAAATGCGAGTCCACGTCGACGGACGTCGCGGCAAGTGGTGGTTGTAACTCAACTCTCTTTGTCGTCGCGGCTACGGCCCGTCGCGCG
TTCGGACTCCAGGACCCCTTCGCGCTCAGGCGCTCCGACCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAACATATCAATAAGCGGAGGAAA
AGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACAGGGAACAACCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTAGTCTGGAGAAGC
GTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTC
TACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGG
GAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGTCGGATGTGGAA
CGGCGACGAGCCGGTCCGCCGATCGACTCGGGGCGTGGACCAGCGTGGATTGGGGGGGCGGCCAAAGCCCGGGCTCTCGATACGCTCGTGGAACGCCGTC
TCCTCGATTGTGGCAGGCAGCGCGCGCCTCCGGCGTGCTTCGGCATCTGCGCGCTCCGGACGCTGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACA
CGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGCTGATTGGTGGGATCCCCCCGAGGGGTGCACCGCCG
ACCGACCTCGATCTTCTGAGAAGGGTTCGAGTGTGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACT
CTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCG
AAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAA
CTTTAAATAGGTAGGACGGCGCGGCTGCTTGGCTGAGC