Detailed information on CNT30639003


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698074Capsicum annuumQuercus lobata5.7238.3188.4295reverse complement

Expression of CNT30639003

Peptides detected in this lncRNA

>peptide 1 (95 aa)
MVEFLVMAIQESCDAVKGFPLGFPTLQIFTCLCNRGVSLLLRCQGGRRSQVEATDALIIQLTPRCHAGKSRGFGWFYLRSILCCNRFDPPKFCEV*

>peptide 2 (34 aa)
GVVQSICRTTKKCINARKNEISISQSGVVDPLAL*

>peptide 3 (32 aa)
MIKMIGSLLNGLVSIATVKPRDHLQIIMKNDK*

>peptide 4 (39 aa)
MLAKAGGSVGFTSDQFFAAIALIHPNSVKFEHQLGVVIF*

>peptide 5 (35 aa)
MLEKMKSLFHNQELLIHWHCRSCSIAELHIYISLT*

>peptide 6 (76 aa)
MRLWHLLLEPCLHSRKVRTGIRFLVHLKSIGGDSSKDEVHATGNNISSFHFVHPLSLQELFIQFVEHLEEHEFSEK*

>peptide 7 (69 aa)
MKFMRLGTTLARFTLFIHYHCRSCSFNLWNTWKSMNFRKNEISISQLGVVQSCLRCLKVCQFLESQGRT*

Sequence

>CNT30639003
CAGGAGTTGTTCAATCAATTTGCAGAACCACAAAGAAGTGCATAAATGCTCGAAAAAATGAAATCTCTATTTCACAATCAGGAGTTGTTGATCCATTGGC
ATTGTAGGAGTTGTTCAATCGCTGAGCTGCATATATATATATCATTGACGTAATCTCCAATCGCTTGCAGAACCATCAGACTGGCCTCTTCCATGTCTGA
ACTATGTATTTCCAACTGCCTGTTGCTCGAACCACGTCTAGCATTTGAGAAAGGGGATTGCTTGTCATAAATTGCTTATATCTCCTCATCGAGATTGGTC
GGGAGTACCTGCAATGATTAAAATGATTGGTTCTCTGTTAAATGGTTTAGTGTCTATTGCCACTGTGAAGCCGAGAGATCACCTCCAGATTATCATGAAA
AATGACAAATAAAAATTACTTGAGAAAGGAGGATGTGATTTAGAGTTGTACATGTGGGTAGACTCTACAGGATCAACAACCATAGCGCACGAAGTATGGT
AGAATTCCTCGTTATGGCTATTCAAGAATCATGTGATGCGGTGAAAGGTTTCCCATTGGGGTTCCCGACCCTCCAGATTTTCACTTGCTTGTGCAATAGG
GGGGTTTCCTTGCTATTAAGGTGTCAAGGCGGTCGAAGGTCACAAGTGGAAGCAACCGATGCTTTGATCATTCAATTGACTCCTCGCTGTCATGCTGGCA
AAAGCAGGGGGTTCGGTTGGTTTTACCTCAGATCAATTCTTTGCTGCAATCGCTTTGATCCACCCAAATTCTGTGAAGTTTGAACACCAATTAGGAGTAG
TCATTTTCTAGTACCAATTACATGATCCAGTGGTATTAACTATCAGAACTGATATTGTTAAAGCTGAAGCATTTCAACTAATTTACTCATTATGTTTATA
GTATGTCTATACATGAACCATTGAAGATTTTTAGTTCATCTCAATATCAATTTATATACTGTTGTTGTTTCCTTTTTCCAGTGCGTTGAGCAAGGAAGAG
GTGTTTCGGGGTAATGATTGTATAGCAATCTGCGTCAATAAAGATCTTCCCTCATCGCTCTTTGTTCTGGTAATCATTTTCCTATATCTGAACTATGCGT
TTATGGCATCTGTTGCTTGAACCATGTTTACACTCTAGAAAGGTGAGGACTGGCATAAGATTTCTAGTCCATCTAAAAAGTATCGGTGGTGACTCGTCTA
AAGATGAAGTTCATGCGACTGGGAACAACATTAGCTCGTTTCACTTTGTTCATCCATTATCATTGCAGGAGTTGTTCATTCAATTTGTGGAACACTTGGA
AGAGCATGAATTTTCGGAAAAATGAAATCTCTATTTCACAGTTAGGAGTTGTTCAATCTTGTCTTCGTTGTCTTAAAGTCTGTCAATTCTTGGAATCACA
AGGAAGAACTTGAATGGTCAGAAACTACGCAAATCAAAAATGTGGATGAAGAATTCCAAACACAGGTTCTTTTTCACCACACGTCTGTCTACTTTGCCTT
CCTTGAGATGAAGCATGCCTTGCTGCACATGGAACATACAGCTCTAATGGAACCCAATATTACATGAGAATAAAAGTTGTTTGATGTAACACATAAAAGA
ACATGTTGTACATTATGGTATATAAATATATTGTTATGGGGCCATATATTTTGCTCGAAT