« Back to Capsicum annuum search


Detailed information on CNT30638988


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639807Capsicum annuumNymphaea colorata94.3393.1196.441797reverse complement
CNT30318212Capsicum annuumCorylus avellana96.968.6897.41846forward
CNT30519047Capsicum annuumJuglans regia95.5494.1597.21820reverse complement
CNT30702609Capsicum annuumQuercus lobata95.5998.9797.251821reverse complement
CNT30283192Capsicum annuumChenopodium quinoa95.4986.3797.421819forward
CNT3021658Capsicum annuumCitrullus lanatus92.8199.6197.851768forward
CNT30632349Capsicum annuumVigna unguiculata94.3374.1997.161797reverse complement
CNT30200773Capsicum annuumPisum sativum94.3861.297.051798reverse complement
CNT30506608Capsicum annuumNicotiana attenuata98.0172.6597.481867reverse complement
CNT3047196Capsicum annuumPrunus dulcis95.5476.1896.811820reverse complement
CNT30544406Capsicum annuumBrassica napus94.3390.1797.331797reverse complement
CNT30309594Capsicum annuumCamelina sativa94.0792.7597.321792forward
CNT3073727Capsicum annuumBrassica juncea94.3396.6197.381797forward
CNT30422282Capsicum annuumPapaver somniferum95.757.7696.651823forward
CNT3025914Capsicum annuumPopulus trichocarpa94.0299.8397.431791reverse complement
CNT30326143Capsicum annuumAsparagus officinalis94.5458.4797.221801reverse complement
CNT3036478Capsicum annuumCucumis melo92.2357.897.671757reverse complement
CNT30334962Capsicum annuumCynara cardunculus95.5948.5595.171821reverse complement

Expression of CNT30638988

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVCTGRLVPSVGDALLALTGRVVPPALLL*

>peptide 2 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 3 (29 aa)
ASSHMLVSKIKPCMCKYEQIQTVKLRMAH*

>peptide 4 (33 aa)
MPTRDRRMLLLGLRRHLMRNQSFWVPGGVWSQG*

>peptide 5 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIVAYHGGDG*

>peptide 6 (44 aa)
MHLLDKRSTRALPVAAMIHDNSTDRTAIVPATHHSNFCPINFRW*

>peptide 7 (47 aa)
MGGGAWPFLVGGAICLVNSVNERDHSLLTSYAEVSLRGQLLRGTTAF*

Sequence

>CNT30638988
TGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTAT
AGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATA
AAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCC
TATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA
CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCAATGAGTCTGGTAATTGGA
ATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGT
TGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCTATGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTG
GCCTTAACTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACAT
TATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCT
TGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCC
TAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGG
GAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCA
GGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTT
AATTCCGTTAACGAACGAGACCACAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGG
AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTTATAGCCTTGGCCGACAGG
CCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGT
TGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAATGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCC
CGCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAA
CCTGCACAGCAGAACGACCCCGCGAACGTGTTTAACAACCGGGGAGTCCGCGCGGGCGGGGTGCTCCGGCACTCCGCACGAGCGCCTCCCCCCGTCCTCG
GCGCG