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Detailed information on CNT30638683

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003894, E-value = 5e-108

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696475	Capsicum annuum	Oryza sativa	99.03	19.96	90.41	511	reverse complement
CNT30676981	Capsicum annuum	Setaria viridis	62.02	51.04	85.94	320	reverse complement
CNT30524664	Capsicum annuum	Setaria italica	95.35	35.94	90.04	492	reverse complement
CNT30639555	Capsicum annuum	Nymphaea colorata	97.67	29.51	92.26	504	reverse complement
CNT30536068	Capsicum annuum	Eucalyptus grandis	99.81	14.95	91.84	515	forward
CNT30513456	Capsicum annuum	Juglans regia	99.81	16.23	92.23	515	reverse complement
CNT30500477	Capsicum annuum	Coffea canephora	100	28.34	93.02	516	reverse complement
CNT30616920	Capsicum annuum	Sesamum indicum	75.97	40.12	89.8	392	forward
CNT30269781	Capsicum annuum	Chenopodium quinoa	99.81	17.43	91.26	515	reverse complement
CNT30730500	Capsicum annuum	Corchorus capsularis	99.81	43.39	93.4	515	reverse complement
CNT30630109	Capsicum annuum	Vigna unguiculata	99.81	16.34	92.23	515	reverse complement
CNT30196411	Capsicum annuum	Pisum sativum	100	40.79	90.5	516	reverse complement
CNT3090649	Capsicum annuum	Solanum tuberosum	100	18.87	93.99	516	reverse complement
CNT30190954	Capsicum annuum	Secale cereale	99.03	57.94	90.8	511	forward
CNT30291213	Capsicum annuum	Triticum aestivum	99.03	14.71	90.61	511	reverse complement
CNT30225309	Capsicum annuum	Hordeum vulgare	93.02	39.83	88.33	480	reverse complement
CNT30401184	Capsicum annuum	Triticum turgidum	99.03	39.55	90.41	511	forward
CNT3088853	Capsicum annuum	Vigna radiata	29.26	37.28	94.04	151	forward
CNT30511396	Capsicum annuum	Solanum lycopersicum	29.46	16.61	94.74	152	reverse complement
CNT30554621	Capsicum annuum	Oryza glaberrima	39.15	93.95	90.1	202	reverse complement
CNT30441975	Capsicum annuum	Aegilops tauschii	96.51	62.48	90.76	498	reverse complement
CNT30248027	Capsicum annuum	Avena sativa	99.42	52.67	89.47	513	forward
CNT30668159	Capsicum annuum	Triticum dicoccoides	81.78	59.1	87.2	422	reverse complement
CNT30310298	Capsicum annuum	Camelina sativa	99.22	33.57	92.97	512	forward
CNT3062651	Capsicum annuum	Arabidopsis lyrata	50.19	31.13	92.66	259	forward
CNT30142438	Capsicum annuum	Lolium perenne	99.03	81.76	89.82	511	reverse complement
CNT3017045	Capsicum annuum	Zea mays	99.03	18.95	91	511	forward
CNT30609809	Capsicum annuum	Gossypium raimondii	53.29	64.71	85.45	275	reverse complement
CNT3068134	Capsicum annuum	Leersia perrieri	47.48	67.68	86.94	245	forward
CNT30655263	Capsicum annuum	Rosa chinensis	99.22	28.37	89.45	512	reverse complement
CNT30206293	Capsicum annuum	Helianthus annuus	99.81	23.44	94.17	515	reverse complement
CNT30126841	Capsicum annuum	Corymbia citriodora	47.48	65.86	92.65	245	reverse complement
CNT30713553	Capsicum annuum	Malus domestica golden	82.95	63.5	93.46	428	reverse complement
CNT30627950	Capsicum annuum	Daucus carota	55.81	66.98	93.4	288	reverse complement
CNT30689044	Capsicum annuum	Triticum urartu	99.03	18.95	90.8	511	reverse complement
CNT30722943	Capsicum annuum	Triticum spelta	99.03	25.38	90.61	511	reverse complement
CNT30364730	Capsicum annuum	Sorghum bicolor	72.67	66.14	89.33	375	forward
CNT30596725	Capsicum annuum	Oryza meridionalis	99.03	14.81	90.8	511	reverse complement
CNT30370808	Capsicum annuum	Oryza glumipatula	39.15	93.09	90.59	202	reverse complement
CNT30154922	Capsicum annuum	Prunus persica	99.81	30.49	90.87	515	forward
CNT30412183	Capsicum annuum	Papaver somniferum	99.81	18.29	93.79	515	reverse complement
CNT30705531	Capsicum annuum	Prunus avium	52.91	97.5	91.94	273	forward
CNT30646402	Capsicum annuum	Cannabis sativa	94.96	38.74	88.57	490	forward
CNT30319706	Capsicum annuum	Asparagus officinalis	99.81	17.92	93.2	515	reverse complement
CNT30332807	Capsicum annuum	Dioscorea rotundata	99.81	31.17	93.2	515	forward
CNT30102929	Capsicum annuum	Oryza rufipogon	99.61	33.77	89.88	514	forward
CNT30574740	Capsicum annuum	Oryza barthii	55.43	58.13	87.76	286	reverse complement
CNT30585638	Capsicum annuum	Echinochloa crusgalli	99.03	33.01	90.8	511	forward
CNT30604668	Capsicum annuum	Oryza punctata	61.82	72.67	90.28	319	reverse complement

Expression of CNT30638683

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MFALLKPTFSLPIRPLPLMRRLPSKAKRSPTDVFLHPTASADHLAPFIFGARALDQ*

Sequence

>CNT30638683
TCTTGAACCGATAACCATCTTTCAGCTAACCTAGCCTCCTCAGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTAC
ACCTTTCGGCCTGATCTTAGGCCCTGACTCACTCTCCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTAGATTCTCACCAATGTTTGC
GTTACTCAAGCCGACATTCTCCCTTCCAATTCGTCCACTACCGCTCATGCGAAGGCTTCCCTCTAAGGCAAAACGCTCCCCTACCGATGTATTTTTACAC
CCCACAGCTTCGGCAGATCACTTAGCCCCATTCATCTTCGGTGCAAGAGCGCTTGATCAGTGAGATATTATGCACTCTTTCAAGGGTGGCTTCTTCTAGG
CAAACCTCCTGGCTGTCTCCGCACCCCTACCTCCTTTATCACTGAGCGGCCATTTAGGGGCCTTAGTTGGTGATCCGGGTTGTTTTCCTCTCAACGATGA
AGCTTATCCCCCATCG