Detailed information on CNT30638659


BLAST search results

BLAST vs Swiss-Prot:
sp|P92996|GL120_ARATH, E-value = 8e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019818Capsicum annuumCitrullus lanatus12.0827.038580forward
CNT3071407Capsicum annuumQuercus suber17.9850.6481.51119forward
CNT3045720Capsicum annuumPrunus dulcis20.2422.3384.33134forward
CNT3090022Capsicum annuumSolanum tuberosum84.8980.5288.79562forward
CNT30599980Capsicum annuumFraxinus excelsior14.835.1382.6598forward
CNT30573118Capsicum annuumVitis vinifera12.3925.6287.882forward
CNT30706383Capsicum annuumPrunus avium20.2421.3482.09134forward
CNT3031606Capsicum annuumTheobroma cacao23.4134.0783.87155forward
CNT30726724Capsicum annuumLupinus angustifolius17.9825.1184.87119forward

Expression of CNT30638659

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MPKVLSPGNWLTFTAVTADPTLFEVFPGTFKPDLKKSSAVTTFGSL

>peptide 2 (34 aa)
MSPMGKTNTSPGCRILVKSLFFIFGPGFERTKPT*

Sequence

>CNT30638659
TCCCAATACAAAGATAAACGTAAATATAATTCCAATCCACAAGACTAGATCATGAGATTTATTTATGATTTCTTAAATTCCAAGGACAAATATAGTTATT
ATTTGGCTTATACTAATCTATAGCTGTTGTCCCACCAGAATTGTGATTGGAGATAATCCACGACTTTCTTATCAACTTGGAATGCTTTTGCAAGAAGATT
GTCATTGATTGGTGGGTCTGAGCCAAATACTGCATTTGCAATAGTGATGACTCCTGGATTTTGACTACTAAGTCCAGCAAATGCAACAGCATTAGTCTTT
CCCACATTAAGTTGAAAATGAATGAGTCCTATGGGGAAAACAAACACATCTCCTGGGTGTAGAATCTTGGTAAAGAGCTTGTTCTTCATATTTGGACCAG
GGTTTGAAAGGACAAAACCAACATAAAGTGTGCCCTCATGGACCGTAAGCACCTCGGTTCCTCTAGGGTGTGTGTGTGGAGGGTTGAGACCATATGGTGC
ATAATCAATACGAACTAATGAAATGCCAAAAGTGTTGAGTCCGGGTAATTGGTTGACGTTCACAGCAGTCACCGCAGATCCAACGTTATTTGAAGTATTT
CCAGGTACATTTAAGCCTGATTTGAAGAAGTCGTCAGCAGTGACAACCTTTGGATCTTTGCA