Detailed information on CNT30638258


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M5L6|CATA_CAPAN, E-value = 1e-150

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30542306Capsicum annuumBrassica napus13.7121.383.6798forward
CNT30574555Capsicum annuumVitis vinifera42.3836.6480.2303forward
CNT3038340Capsicum annuumCucumis melo39.0270.180.29279forward

Expression of CNT30638258

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MFLFNTNRPTGINGKISSGFIIWIKSFHSG*

>peptide 2 (84 aa)
MISTSDPNSFFLRHGLDTASWLPVELHIMCFPSFVDQLISVNTKTFHVSVICRETNIIVEESKRMQTLREEREEIKDPPVFLNV*

>peptide 3 (52 aa)
MARVKCELLVLCKEVIDVPIQYQSTNWHQWQDILRVHNLDKKFPLRVVSSSN*

>peptide 4 (34 aa)
MCDFGFGFNARIVSGNDFASRLKKTGTLFPTRSKL

>peptide 5 (32 aa)
MRAARSLQRSYRCSYSIPIDQLASMARYPQGS*

Sequence

>CNT30638258
GGAGCTGCATATAGTTTAGTCCAATACGGTGTCTCTGAGTATCAGCATATGCAAATATCCTAGTCTGGAGAAGCTTATCCTCCGAATAGTAGATACCAGG
GACAATATTATCAGCATATGCAAATATCCTAGTCTGGAGAAGCTTATCCTCCGAATAGTAGACACCAGGGACAATATGGCCAGGGTTAAATGCGAGCTGC
TCGTTCTCTGCAAAGAAGTTATCGATGTTCCTATTCAATACCAATCGACCAACTGGCATCAATGGCAAGATATCCTCAGGGTTCATAATTTGGATAAAAA
GTTTCCACTCAGGGTAGTTTCCAGCAGCAATTGAATCGTAGAGATCCTTGGTGGCGTGGCTATGATTAGTACCTCCGACCCTAATAGCTTCTTCCTCCGT
CATGGACTTGACACCGCAAGTTGGCTTCCAGTGGAACTTCACATAATGTGCTTTCCCAGCTTTGTTGATCAATTGATAAGCGTGAACACCAAAACCTTCC
ATGTGTCTGTAATCTGTCGGGAGACAAACATCATCGTAGAAGAAAGCAAACGTATGCAAACTCTCCGGGAGGAAAGAGAAGAAATCAAGGATCCTCCAGT
TTTCCTGAATGTGTGACTTTGGATTTGGTTTCAATGCACGAATCGTGTCAGGGAATGACTTTGCATCACGATTAAAGAAGACGGGGACATTGTTTCCAAC
AAGATCAAAGTTACC