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Detailed information on CNT30638211


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M5L6|CATA_CAPAN, E-value = 6e-122

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516671Capsicum annuumJuglans regia33.8740.3880.95189forward
CNT30616919Capsicum annuumSesamum indicum21.3336.8486.55119forward
CNT30282683Capsicum annuumChenopodium quinoa34.7721.0679.9194forward
CNT3021611Capsicum annuumCitrullus lanatus35.6650.1383.92199forward
CNT3070085Capsicum annuumQuercus suber31.3626.8483.43175forward
CNT30381388Capsicum annuumManihot esculenta35.333.7979.19197forward
CNT30708944Capsicum annuumGlycine max21.3320.9183.19119forward
CNT3046375Capsicum annuumPrunus dulcis65.5952.4480.05366forward
CNT30168584Capsicum annuumPistacia vera13.9828.7888.4678forward
CNT3098188Capsicum annuumSolanum tuberosum49.155.2490.51274forward
CNT30563752Capsicum annuumActinidia chinensis58.4266.9479.75326forward
CNT3085325Capsicum annuumVigna radiata33.6926.5981.91188forward
CNT30668803Capsicum annuumTriticum dicoccoides22.416.2583.2125forward
CNT30313019Capsicum annuumCamelina sativa28.3225.8281.65158forward
CNT3080335Capsicum annuumBrassica juncea37.4636.8680.86209forward
CNT30260467Capsicum annuumBrassica rapa22.9430.783.59128forward
CNT30475173Capsicum annuumSaccharum spontaneum20.2515.2183.19113forward
CNT30654455Capsicum annuumRosa chinensis32.0839.1779.89179forward
CNT30714909Capsicum annuumMalus domestica golden65.5969.4580.6366forward
CNT30624536Capsicum annuumDaucus carota38.8915.4483.41217forward
CNT30478285Capsicum annuumArabidopsis halleri28.3245.6681.01158forward
CNT30154060Capsicum annuumPrunus persica65.5936.4578.96366forward
CNT30704838Capsicum annuumPrunus avium55.259.1280.84308forward
CNT3022395Capsicum annuumPopulus trichocarpa20.7928.2288.79116forward
CNT3038372Capsicum annuumCucumis melo57.7129.2782.61322forward
CNT3050211Capsicum annuumCucumis sativus39.2558.2484.93219forward

Expression of CNT30638211

Peptides detected in this lncRNA

>peptide 1 (86 aa)
SAKKLSMLLFNTNRPTGINGKISSGLNASCSFSAKKLSMFLFNTNRPTGINGKISSGQVLVTSRGSKSNLSTSSGFIIWIKSFHSG*

>peptide 2 (92 aa)
LCKEVIDVTIQYQSTNWHQWQDILRVKCELLVLCKEVIDVPIQYQSTNWHQWQDILRPGLGYVKRVKVEFVNILRVHNLDKKFPLRVVSSSN*

>peptide 3 (50 aa)
MRAARSLQRSYRCSYSIPIDQLASMARYPQARSWLRQEGQSRICQHPQGS*

>peptide 4 (83 aa)
MISTSDPNSFFLRHGLDTASWLPVELHIMCFPSFVDQLISVNTKTFHVSVICRETNIIVEESKRMQTLREEREEIKDPPVFLNV

Sequence

>CNT30638211
CTCTGCAAAGAAGTTATCGATGTTACTATTCAATACCAATCGACCAACTGGCATCAATGGCAAGATATCCTCAGGGTTAAATGCGAGCTGCTCGTTCTCT
GCAAAGAAGTTATCGATGTTCCTATTCAATACCAATCGACCAACTGGCATCAATGGCAAGATATCCTCAGGCCAGGTCTTGGTTACGTCAAGAGGGTCAA
AGTCGAATTTGTCAACATCCTCAGGGTTCATAATTTGGATAAAAAGTTTCCACTCAGGGTAGTTTCCAGCAGCAATTGAATCGTAGAGATCCTTGGTGGC
GTGGCTATGATTAGTACCTCCGACCCTAATAGCTTCTTCCTCCGTCATGGACTTGACACCGCAAGTTGGCTTCCAGTGGAACTTCACATAATGTGCTTTC
CCAGCTTTGTTGATCAATTGATAAGCGTGAACACCAAAACCTTCCATGTGTCTGTAATCTGTCGGGAGACAAACATCATCGTAGAAGAAAGCAAACGTAT
GCAAACTCTCCGGGAGGAAAGAGAAGAAATCAAGGATCCTCCAGTTTTCCTGAATGTG