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Detailed information on CNT3063784


BLAST search results

BLAST vs Swiss-Prot:
sp|P08221|CB21_CUCSA, E-value = 1e-134

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696247Selaginella moellendorffiiOryza sativa47.1750.3787.25541forward
CNT30641326Selaginella moellendorffiiNymphaea colorata47.1748.4384.1541forward
CNT30188246Selaginella moellendorffiiSecale cereale45.2549.0187.48519forward
CNT30589827Selaginella moellendorffiiMusa acuminata30.5145.8786.29350forward
CNT30555049Selaginella moellendorffiiOryza glaberrima47.1745.9387.25541forward
CNT30131530Selaginella moellendorffiiLolium perenne45.1663.2584.56518forward
CNT30363150Selaginella moellendorffiiSorghum bicolor47.1744.7587.8541forward
CNT30103422Selaginella moellendorffiiOryza rufipogon49.2643.5686.73565forward
CNT30117570Selaginella moellendorffiiOryza nivara47.1751.8287.25541forward

Expression of CNT3063784

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MAWTKKPNMENIASRPFLSSFTLSSANASGSSANPRGSKLPPG*

>peptide 2 (46 aa)
MPFLERSSGKTHPSAPSIAQREWITSSSLFLAKVSGSAESPAVSQP*

>peptide 3 (47 aa)
MWMERPLWRWQSWRPLLDRSKQPKGKRRGLLECSLTTHWTAAPTLPV*

>peptide 4 (62 aa)
MYKKNSFGIHSVVETPKRKKNLRTFFFFLWLECGIIHPIDLIRLFAPTMPWRDALGISKTRG*

Sequence

>CNT3063784
CTCAATTTAAATTTGTTTTAAAAAAGGAGGAACAGCGTTCCTTTGTTTTATTAAAATCAATCTTTATAATACAGCAAACCAGGGCATAGATGGATCTTTC
CCCCCCCTTCCATGTACAAAAAGAATTCATTTGGAATTCATAGCGTAGTAGAGACACCCAAAAGAAAAAAAAACCTTAGAACATTTTTTTTTTTTTTGTG
GTTGGAGTGTGGTATCATTCACCCGATCGATTTGATTCGCCTCTTCGCGCCCACCATGCCCTGGAGAGATGCCCTGGGAATCTCTAAGACCCGGGGGTGA
AGTTGGTGGTCGGACAAGTTCTCGAGGGGGCCCTTACCGGTGACGATGGCCTGGACAAAGAAGCCAAACATGGAGAACATCGCCAGCCGTCCATTCTTGA
GCTCCTTCACCTTGAGCTCCGCAAACGCCTCGGGATCCTCGGCCAATCCAAGGGGGTCGAAGCTGCCACCTGGGTAGATCGGGTCCGTCACCTCGCCCAA
CGGCCCTCCGGCGATGCGGTAGCCCTCCACGGCGCCCATGAGGATGACCTGGGACGCCCAGATGGCGAGGATGGACTGGGCGTGGACGAGGCTAGGGTTG
CCCAGGTAGTCGAGGCCGCCCTCCTTGAAGATCTGGGAGCCGGCCTTGAACCACACCGCCTCGCCGAATTTGATGCCGTTCTTGGAGAGGAGCTCCGGGA
AGACGCATCCCAGCGCGCCCAGCATCGCCCAGCGGGAGTGGATCACCTCGAGCTCCCTGTTCTTGGCGAAGGTCTCTGGGTCGGCCGAGAGCCCGGCGGT
GTCCCAGCCGTAGTCGCCCGGGTACTCGCCGGTGAGGTACTTGACGCGGTCGGGGCCATACCAGGGGCTGCCTCCTCCCACCGAGGAAGCCCTGCCGGTC
TTGCGCATCGCGACCCGGGAGCCATTGCTAGCGTTGCGGGCGACGAACTCGTTCTGGGGCTTGAGACCGGTCTGGCCGGCGAATGTGGATGGAGCGGCCA
TTGTGGCGGTGGCAGTCATGGCGGCCATTGCTCGATCGATCTAAGCAACCAAAGGGGAAGAGAAGAGGTCTGCTCGAATGCTCACTCACTACACACTGGA
CTGCTGCCCCAACACTCCCAGTGTAGTGTTTAAATGCGCGCCTTACC