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Detailed information on CNT30637620


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004692, E-value = 7e-92

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672466Capsicum annuumSetaria viridis14.6978.7789.01282forward
CNT30535563Capsicum annuumEucalyptus grandis13.183186.96253forward
CNT30316757Capsicum annuumCorylus avellana12.7620.4589.8245forward
CNT30546688Capsicum annuumIpomoea triloba13.446093.02258forward
CNT30378189Capsicum annuumArabidopsis thaliana14.2266.190.11273forward
CNT3021062Capsicum annuumCitrullus lanatus13.0243.8685.6250forward
CNT30727589Capsicum annuumCorchorus capsularis14.6982.9491.49282forward
CNT30380125Capsicum annuumManihot esculenta14.6923.5290.78282forward
CNT30629544Capsicum annuumVigna unguiculata14.937.8387.06286forward
CNT30195181Capsicum annuumPisum sativum14.5859.0788.21280forward
CNT30503993Capsicum annuumNicotiana attenuata1069.8292.19192forward
CNT30712080Capsicum annuumGlycine max14.6938.9585.46282forward
CNT30160107Capsicum annuumPistacia vera14.2261.0789.38273forward
CNT3093993Capsicum annuumSolanum tuberosum14.3252.6892275forward
CNT30287202Capsicum annuumTriticum aestivum12.6633.886.83243forward
CNT30224124Capsicum annuumHordeum vulgare14.6994.9588.65282forward
CNT30541587Capsicum annuumBrassica napus13.2821.6888.24255forward
CNT30237858Capsicum annuumBrassica oleracea13.2857.0587.45255forward
CNT30509848Capsicum annuumSolanum lycopersicum11.5696.5295.05222forward
CNT30146188Capsicum annuumMedicago truncatula14.6935.9286.52282forward
CNT30440628Capsicum annuumAegilops tauschii12.2932.1586.44236forward
CNT30252099Capsicum annuumAvena sativa12.4546.4185.36239forward
CNT3078925Capsicum annuumBrassica juncea13.1821.6188.14253forward
CNT30614218Capsicum annuumArabis alpina13.8545.9485.71266forward
CNT30598511Capsicum annuumFraxinus excelsior13.1238.7185.71252forward
CNT3015474Capsicum annuumZea mays11.5138.4387.33221forward
CNT30608684Capsicum annuumGossypium raimondii11.7253.4490.22225forward
CNT30647369Capsicum annuumRosa chinensis10.7322.7486.89206forward
CNT30689637Capsicum annuumTriticum urartu14.6928.8988.3282forward
CNT30721628Capsicum annuumTriticum spelta8.8551.3689.41170forward
CNT30338600Capsicum annuumEragrostis tef14.1756.6788.24272forward
CNT30480842Capsicum annuumArabidopsis halleri7.6630.1891.16147forward
CNT30368333Capsicum annuumSorghum bicolor9.957190.05191forward
CNT30355601Capsicum annuumLactuca sativa12.2931.0986.86236forward
CNT30423884Capsicum annuumPapaver somniferum13.9132.686.14267forward
CNT30570869Capsicum annuumVitis vinifera14.3782.8891.67276forward
CNT30706335Capsicum annuumPrunus avium12.7121.6987.7244forward
CNT30644842Capsicum annuumCannabis sativa21.0410088.37404forward
CNT3052982Capsicum annuumAmborella trichopoda14.7421.6483.39283forward
CNT3024873Capsicum annuumPopulus trichocarpa12.8143.6286.59246forward
CNT30120974Capsicum annuumCitrus clementina14.6946.5391.84282forward
CNT3037774Capsicum annuumCucumis melo13.8534.4185.34266forward
CNT30101083Capsicum annuumOryza rufipogon14.1150.7588.19271forward
CNT30585575Capsicum annuumEchinochloa crusgalli12.1445.686.7233forward
CNT30116334Capsicum annuumOryza nivara12.7640.1689.39245forward
CNT30594407Capsicum annuumEragrostis curvula14.5898.5989.29280forward
CNT30176122Capsicum annuumVigna angularis14.925.2785.66286forward
CNT30726347Capsicum annuumLupinus angustifolius14.5858.788.57280forward

Expression of CNT30637620

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MSLTAKRPNGGYSAKVSTTMGLVGIILTIPASPFFKNLGSFSSSLPERLSILVKISANLTAMWETEWLV*

>peptide 2 (29 aa)
MRTAQSAWEVPVIMFLIKSLCPGASMTVQ*

Sequence

>CNT30637620
GTTAATTTGAGGATAATACAAGAAAAAAGATTCAGGAATTACTGCTGATGTTTTGTCTGTAAATAAGCAATAACAACATTGAAGATAGTTGTTGCTTCAA
GTTCTTGCTCTTTCAACAAAGGTTGTCTAATTATTGAAACGGTAATGTATTTTAACAACGGACGCACTGTAATGTGTACATGGTAAAAGTCAAAGAAAAA
ACTAGATGAAACAAGAATCGGAAAACTTAAAACAGCAACAAAATGAACGTACCAAAAACTATAATTTTTCTCTCAAGGAGTATAAATATTAAAGACTAAA
AAGCTAGTTTCACAAAAGATCAAAGGCAAACAAACTCTTGAAGCAACACTAGATCACGCAACCACTACTAAACCTAGGGAGAGACGAGAACCGAAAAAGA
CCAGGCTACACACAAAGCTATAATTCAATCCTTATAGTAGCAGCCTACGTTGTTCAAACACAGAAGAAAAAAAATCAAAGCAAAACTTCCCAGCCTCTTA
TGTTTAAGATAAAACAAAGTACAACTAGACCACCATAGACACACCAAGAACACAAGGTTAAAACAGAGACAAGCAGCTCATGATTTACCAGGTCACAGAT
GACAGCAAAGAACTGGCTCAATTTGAATAAGATTAGTTGCTCTTCAGGATAAGGCAATGGCAGAAAATAGGGAAGCTACGGTGCAATGATGAATGAGCAA
CTGTAGAATCATAAAGAGAACACAGAGAATGTAGAAGAGAAAAGATATCCCAAAAACACATATTAAAACCGTCTCAGCAGATCATCTTGAAATTCGCTAT
AAAAAACAGACACGAGAAAGGCATCCAGAGGTACTAATGTCATTGCCCATCAAGCAACTTGGATAAAAACCAAATTGCTCGATAACTCCAGTATCCTCAA
AAGAGGCTAGAGAACCATGACAAAGCTTCTAGAGACATTTCCAGTGCAGGTAAATTGTTCAAAACAAAATCGAAAATAGCTAATGCAATTAAACAAAACT
AGTTCATAAATCCAGAATCTCATCAAAAACACCTCACTTCTTCTTCTGAGCAGCCTTGGTGACTTTGGCACCAGTAGGGTCCTTCTTGTCAACATTTTTG
ACGACACCAACAGCAACAGTTTGACGCATGTCCCTCACAGCAAAACGTCCCAATGGTGGGTACTCAGCAAAAGTTTCAACCACCATGGGCTTGGTGGGAA
TCATCTTAACCATACCAGCATCACCATTCTTCAAGAATTTGGGCTCCTTCTCAAGTTCCTTACCAGAACGTCTATCGATCTTGGTCAAGATCTCAGCAAA
CTTGACAGCAATGTGGGAGACGGAGTGGCTTGTCTGAGGGCCTCTTGGGCTCATTAATCTGGTCAAGAGCCTCAAGTAGGGTTGGGCCCTTGTACCAGTC
GAGATTAGTTGATCGCTCAATCATGTTGTCTCCTTCGAAACCAGAGATGGGGACAAAGGGGATTTTGTCAGGGTTGTACCCAACCTTCTTGAGGTAGGAA
GAAACTTCCTTCACAATTTCATCATACCTGGCCTTGGAGTATTTGGGGGTGGTAGCATCCATCTGCAGAAGGCAAGCAACAGAATTAGCCAACTTGCAAC
ATCAACTTTCACAAGAATAAAAGATAACAGTAAAAGAGACCTTGTTACAGCAGCAAATCATTTGCTTGACACCGAGGGTGAAAGCAAGCAATGCGTGCTC
ACGGGTCTGTCCATCCTTGGAGATACCAGCTTCAAAACCACCAGTGGTGGAGTCAATAATGAGGACAGCACAGTCAGCCTGGGAGGTACCAGTAATCATG
TTCTTGATAAAATCCCTGTGTCCAGGGGCATCAATGACAGTGCAGTAGTACTTTGTGGTCTCGAACTTCCACAAGGCAATATCAATGGTAATACCACGTT
CACGCTCTGCCTTCAGCTTG