Detailed information on CNT30637615


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508578Capsicum annuumSolanum lycopersicum8.523.1393.5562forward
CNT30666800Capsicum annuumTriticum dicoccoides7.5423.2194.5555reverse complement
CNT30717952Capsicum annuumMalus domestica golden11.2522.8493.982reverse complement
CNT30620547Capsicum annuumCajanus cajan16.8739.1791.87123reverse complement
CNT30724130Capsicum annuumLupinus angustifolius9.3320.3694.1268reverse complement

Expression of CNT30637615

Peptides detected in this lncRNA

>peptide 1 (33 aa)
NSHVRFCSRDGIQKQPSTITPKEPDSVNNIEEE*

>peptide 2 (55 aa)
MHLYFLFPYSKGSIRNSFSISLELVVWFAYTLSFPDPTMWKYIEYFTIVVVEIKVI

>peptide 3 (46 aa)
MEDKMRKVRLCWFGHVMKKDFGAPVRRCETLVMDDFKRGRGRPKKY*

Sequence

>CNT30637615
GAAACTCTCACGTCCGGTTCTGTAGTAGAGATGGAATTCAGAAACAACCATCAACTATAACCCCAAAAGAACCAGATTCCGTAAACAACATAGAGGAAGA
ATGAAGGGAATATCTTATCGAGGGTGAGGAATCAGATTATTTGCAAAAGGTGAGAGCTACTTCGATGGAGGACAAGATGCGAAAAGTGAGGTTATGTTGG
TTTGGGCACGTGATGAAGAAGGATTTCGGTGCTCCAGTGCGGAGGTGTGAGACACTCGTTATGGATGATTTTAAGCGGGGTAGAGGTAGGCCGAAGAAAT
ATTGAAGGGAAATGATTAGGCATGATATGGAGCAGTTACAACTTACGGTGGACATGACCCTTAATAGGAAGGATTGAAGGATGCGGATTAGGGTAGAGGG
TTAGGGGATGGGAGTGCGTCGGTAATATTACGGGAGCATTCTTTATTTATGTCTGTAGTTTCTTGTTCGTGGGTTGAGTGTTGTCTATGCTTTCAGATAT
ATAGTTTTTAGTAGTATCTTGTGGTTAGCGTTATTAGTTTATTTTGCATGTACAAGTTTATATGCATTTATATTTTTTATTTCCATATAGTAAGGGGTCT
ATCAGAAACAGCTTCTCTATTTCGCTTGAGTTAGTAGTGTGGTTTGCGTACACTCTATCCTTCCCAGACCCCACTATGTGGAAATACATTGAATATTTTA
CTATTGTTGTTGTTGAAATTAAAGTTATT