Detailed information on CNT30637537


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533065Capsicum annuumEucalyptus grandis27.9522.2283.33168forward
CNT30712184Capsicum annuumGlycine max40.140.1785.06241forward
CNT30714122Capsicum annuumMalus domestica golden36.7753.5183.26221forward
CNT30627901Capsicum annuumDaucus carota41.4321.2886.35249forward
CNT30720008Capsicum annuumTriticum spelta16.3140.3388.7898reverse complement
CNT30362263Capsicum annuumSorghum bicolor38.2726.5981.74230forward
CNT30595932Capsicum annuumOryza meridionalis25.2911.4484.87152forward
CNT30318962Capsicum annuumAsparagus officinalis41.4311.9484.34249forward
CNT30148380Capsicum annuumBrachypodium distachyon42.4318.8181.96255forward
CNT30575742Capsicum annuumOryza barthii42.4356.9281.18255forward
CNT30726606Capsicum annuumLupinus angustifolius41.4321.1285.54249forward

Expression of CNT30637537

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MIRISGSDVDEHIELFMWLRALIAQAQLHNY*

>peptide 2 (33 aa)
MLYFCCEIQHQRCTEFFPLTEYMQPKGGIMEENY

>peptide 3 (38 aa)
MDQSELKVGSTLDLTRIAPSILLRSLVSNPGSDWSRPC*

Sequence

>CNT30637537
ATTTGGAGAACCCAATAAATTTAGTTCATCATGGGCAAAGACACTATTGCTGAGATAATAACTTCTATACTATTGCTGAGATAATAACTTCTATACAAAA
TAAGGATATGGATCAAAGTGAATTGAAAGTTGGATCTACATTGGATCTCACCCGAATTGCCCCATCTATCCTCCTAAGGAGTTTGGTTTCAAATCCCGGT
TCGGATTGGAGTAGGCCATGCTAATGTGTTTTAGATGATCCGCATATCAGGGTCGGACGTCGATGAGCACATTGAACTGTTCATGTGGCTGAGAGCCCTC
ATAGCTCAGGCACAACTACACAATTATTAGGGGCATGCTCTACCGTTGAGCTAATAGCCTGTCATGGATATCAATACTACAGCTAGTACAACAACAAATA
CAAACAAGCTTAAACCCACGAAAAGCAAGATCACACTCCCATCCGGCTAATTTTCTATTCTAATACGCGTCCTCCGCACCCTTCTTAAAGAGACCAAATG
CTTTATTTCTGTTGTGAGATTCAACATCAAAGGTGTACTGAATTTTTCCCTTTAACCGAATACATGCAACCAAAGGGTGGCATAATGGAAGAGAACTACA
T