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Detailed information on CNT30637481


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671345Capsicum annuumSetaria viridis64.5126.6497.23289reverse complement
CNT30641383Capsicum annuumNymphaea colorata65.629.4194.22294forward
CNT30550219Capsicum annuumIpomoea triloba83.938.6697.07376forward
CNT30702366Capsicum annuumQuercus lobata64.5129.0297.58289reverse complement
CNT30618341Capsicum annuumSesamum indicum67.4155.9397.02302forward
CNT30504586Capsicum annuumNicotiana attenuata10025.4498.44448forward
CNT30712072Capsicum annuumGlycine max71.4350.4794.06320forward
CNT30221833Capsicum annuumHordeum vulgare65.1821.3994.86292forward
CNT30384972Capsicum annuumTriticum turgidum65.1847.1796.58292reverse complement
CNT30569654Capsicum annuumActinidia chinensis84.3810.895.5378forward
CNT30543267Capsicum annuumBrassica napus64.0621.0193.73287forward
CNT30147396Capsicum annuumMedicago truncatula70.7610.6695.58317forward
CNT30441199Capsicum annuumAegilops tauschii65.1829.4196.58292forward
CNT30258490Capsicum annuumAvena sativa48.8830.3396.35219forward
CNT30202530Capsicum annuumHelianthus annuus83.9351.396.01376forward
CNT30682011Capsicum annuumTriticum urartu54.9125.2395.93246forward
CNT30369921Capsicum annuumOryza glumipatula50.6798.796.92227forward
CNT30484247Capsicum annuumChara braunii29.029.3488.46130reverse complement
CNT30434185Capsicum annuumPapaver somniferum65.442.990.44293forward
CNT30571858Capsicum annuumVitis vinifera91.0711.7797.55408reverse complement
CNT3057237Capsicum annuumAmborella trichopoda41.0713.3392.93184forward
CNT3038324Capsicum annuumCucumis melo89.0621.1695.49399reverse complement
CNT30557400Capsicum annuumPanicum hallii65.1821.2895.55292forward

Expression of CNT30637481

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MKESQPIPEIAVSLATSLVAAPYLLIRNYYHKKVAPISKRAYA

Sequence

>CNT30637481
CGTGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAACCCTAGTACGAGAGGACTG
GGTTGGGCTAACCTATGGTGTACCGGTTGTTATGCCAATAGCAACGCTGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTAT
ATACAAGTTCTCGGACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTAAGCACCGTGAGGTGTGAAGCGATCTCGTACTAAACGAAATGACTTT
CACTTTCCATAACAAAAATGAAAGAAAGTCAACCTATTCCTGAAATTGCGGTCAGTCTCGCTACCTCTTTAGTTGCCGCCCCCTACTTGCTCATTCGCAA
TTACTACCACAAGAAAGTCGCCCCTATCTCTAAAAGGGCTTATGCACT