Detailed information on CNT30637410


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-169

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3097364Capsicum annuumSolanum tuberosum64.7199.2192.271126forward
CNT30568725Capsicum annuumActinidia chinensis64.4896.7281.191122forward
CNT30460578Capsicum annuumSaccharum spontaneum65.4656.9281.911139forward
CNT30609009Capsicum annuumGossypium raimondii44.9481.9783.38782forward
CNT3028051Capsicum annuumTheobroma cacao65.5793.681.511141forward

Expression of CNT30637410

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVSELSTSKVMVFPVNVLTKICIPPLSRSTRWRVDSF*

>peptide 2 (40 aa)
MVSELSTSKVIVFPVSVLTKICIPPLKRSTKWSVDSFWML*

>peptide 3 (42 aa)
SVNIHWRLSVMRISKLLDKLDSTVRIQANIINKKNIGSRQKR*

>peptide 4 (47 aa)
MKIIVNSSIAKFIPETIVQSTQTQCHQSKTRSLKNIFRPKDRSRNQS*

>peptide 5 (48 aa)
MECGLFLDVVISKSPPILKLLASKNQTLLVWWNPFFVLDLCFHIIDGV*

>peptide 6 (57 aa)
MFSQRSACHHADEGQGGGWTPFGCCSQQEFCHPPTAFQQRSTFADQGEFLPCLESLP*

Sequence

>CNT30637410
GTTCGGTCAATATACACTGGAGGCTATCAGTTATGAGGATATCTAAATTGTTGGACAAGTTAGATAGCACAGTTCGAATACAGGCCAATATAATCAATAA
GAAAAATATTGGCTCAAGACAAAAAAGATGAGATTGAAATAGGCTAGCCTTCTCTGTCGTGTCTTTGCTTTCTTCCTGCCGATTGATGCCGGAGCAGTGT
GCAATTCCAAATTTGGAAAAGCTAACAGATGGTTAGTAGTTTCAAGTGCTAGAGAATATAAAATATGGTGCTCCAATATAACAAACGAGTATAGTAAGGA
CTAATTGATAAAAAACCATAGCAGGACACATTTGAAAGACCACCTAAATACCATATTTGCATAACGTGGCAAGACCCATCCCTATATTGACTCCCAACCT
GCGCGACCCTTAAAACACAAACGCATTCAATACCAAGGATGAAAATCATAGTAAATAGTAGCATAGCTAAATTTATTCCAGAAACGATAGTTCAAAGCAC
ACAAACACAATGTCACCAAAGCAAAACCAGAAGTCTTAAAAACATCTTTCGACCAAAGGATCGAAGCAGAAACCAGTCATAAGAGCATTAAATTCTCAAA
AGCCACCACGGAGACGAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAATCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAAT
CAGCCTCTGCTGGTCTGGCGGGATACCCTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAGGTGATCGTCTTC
CCAGTCAGCGTCTTGACAAAGATTTGCATTCCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCAAGAGTCCTCC
CATCCTCAAGCTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTTGCTTTCACATTATCGATGGTGTCTGA
ACTCTCAACCTCCAAGGTGATGGTCTTTCCAGTCAATGTCTTAACGAAAATCTGCATACCACCCCTCAGCCGCAGCACCAGATGGAGGGTTGATTCCTTC
TGAATATTGTAGTCAGCAAGGGTACGACCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGAATTT
TTGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCAAGGGTAATAGTCTTTCCAGTCAAGGTTTTCACAAAGATCTGCATGCCACCACGCAGGCG
AAGGACAAGGTGAAGGGTGGACTCCTTTTGGATATTGTAGTCAGCAAGAGTTCTACCATCCTCCAACTGTTTCCCGGCGAAGATCAATCTCTGTTGATCT
GGAGGAATTCCTTCCTTATCTTGGATTTTAGCTTTGACGTTATCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCCGTCAATGTTTTCA
CAAAGATCTGCATGCCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTTCTGCCATCCTCCAACTGCTT
TCCAGCAAAGATCAACCTTTGCTGATCAGGGGGAATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTATCGATTGTGTCAGAACTCTCAACCTCGAGA
GTGATGGTCTTTCCGGTGAGGGTCTTAACAAAGATTTGCA