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Detailed information on CNT30637323


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Capsicum annuumOryza sativa33.515.191.33473reverse complement
CNT30670953Capsicum annuumSetaria viridis22.3134.1393.33315reverse complement
CNT30521002Capsicum annuumSetaria italica8.5726.8393.39121forward
CNT30550263Capsicum annuumIpomoea triloba78.759.6489.31112forward
CNT30378671Capsicum annuumArabidopsis thaliana10.6953.5594.7151reverse complement
CNT30158473Capsicum annuumPistacia vera4.3928.4496.7762forward
CNT3098505Capsicum annuumSolanum tuberosum68.798.8890.1970reverse complement
CNT30304298Capsicum annuumTriticum aestivum33.517.8891.12473reverse complement
CNT30400948Capsicum annuumTriticum turgidum33.518.9291.12473reverse complement
CNT30554921Capsicum annuumOryza glaberrima9.5638.2494.81135forward
CNT30147387Capsicum annuumMedicago truncatula40.8686.3890.64577reverse complement
CNT30435015Capsicum annuumAegilops tauschii33.3641.7991.3471reverse complement
CNT30314095Capsicum annuumCamelina sativa31.873084.44450reverse complement
CNT30263293Capsicum annuumBrassica rapa12.1140.9190.64171reverse complement
CNT3018235Capsicum annuumZea mays27.4820.0491.49388forward
CNT30210912Capsicum annuumHelianthus annuus75.2849.8888.711063forward
CNT30687939Capsicum annuumTriticum urartu9.8435.3790.65139forward
CNT30360998Capsicum annuumLactuca sativa18.9192.0793.26267forward
CNT30323793Capsicum annuumAsparagus officinalis10.9849.0590.32155forward
CNT30151602Capsicum annuumBrachypodium distachyon11.933.5391.07168reverse complement
CNT30575706Capsicum annuumOryza barthii33.1419.289.53468forward
CNT30581589Capsicum annuumEchinochloa crusgalli29.1842.2192.48412reverse complement
CNT3040451Capsicum annuumMarchantia polymorpha12.6130.3289.33178forward

Expression of CNT30637323

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MWNRLAPYVLRLFGRHGPSPVKNAIKKDYDIKTPLFFQFPGYCVLIILI*

>peptide 2 (72 aa)
MKLESLVIADQHAVVNMYPGPVHTSRHTLGISFARSIGPMITHDFCGTLMPQRPFVVLLVHTTVGSSTGVKX*

>peptide 3 (78 aa)
MPRPNKQLKNQQKGTCRTDERLPVIYWRKMGMTLSPHGPYGMGHTRATMAITIGRKAVRQSESGKIASVRIVLCNLGT*

Sequence

>CNT30637323
GAATTGACGGGGGCCTACACAAGTAGTGGAGCATGTGGTTCAATTCGATACAATGCGCAAAACCTTACCAGCCCTTGACATATAAACAAGAAAACCTATC
CTTAACGGGATGGTACTGACTTTCATACAGGTGCTGCATGGCTATCGTCATCTCGTGTCGTGAGATGTTTGCTCAAGTCCTATAACGAGCAAAACCCTCA
TTTTGTGTTGCTGAGGCATGCGTCTAAGGAGAAAGTCTTTCCAACCGAAGTGAGCTGAGGAGCCGTGTGACGTGCCAGCGCTACTAATTGAGTGCCAGAA
CCTAGCTGTGCTGCCAGTAAGAAGGTAGCCGGTGCCTTTTGAAGCACTTTCTATTTCTAGTTAGTGCTCTTTTTTGATTGCAGCTAGCGCGCTTAACTAA
TGATGATAGAAAGAGCCTTTCTCTCTTGTTTAGTAAAGTCGATGTTTTTGGCTATATCTTTCAGGTGACGATGATGTCAAGTTGAAGGCAAAGAAAGACT
TGGTATTCAGGTGAGCCACCCGGTGGTGTGGTACGTAGTGGGTTTAGTATGCCCCGCCCAAACAAACAGCTCAAAAACCAACAAAAAGGTACATGCCGCA
CTGACGAAAGACTGCCAGTGATATACTGGAGGAAGATGGGGATGACGTTAAGTCCACATGGCCCTTATGGGATGGGCCACACACGTGCTACAATGGCAAT
TACAATAGGAAGAAAGGCTGTAAGGCAGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTTAGGAACATGAAGTTGGAATCTCTAG
TAATCGCAGATCAGCATGCCGTGGTGAATATGTACCCAGGCCCTGTACACACCTCTCGTCACACCCTGGGAATTAGTTTCGCCCGAAGCATCGGACCAAT
GATCACCCATGACTTCTGTGGCACACTTATGCCACAAAGGCCTTTCGTGGTCTTATTGGTGCATACCACGGTGGGGTCTTCGACTGGGGTGAAGNGGTAG
CCGTAGGGGAACCTGTGGCTGGATTGAATCTTTCGCGATGGAAATGCACTCTTCCCCTAACTTTCCAACATAGGGGGCTAGCTTGCTTTCACTGGTGGCG
GGCAGACGAAGGGTCCAAAGGACACGTATCCGGGTGCGAGTCAAAAATCCAATTGTTCCATTTTCCTTCTTGTTCATCAATCGGAAATTAAGACAAACCG
GGCACTACGGTAAGACGTGAAAACACCCCATCCCATTCCAACCTCGATATGTGGAATCGTCTTGCGCCATATGTACTGAGATTGTTTGGGAGACATGGTC
CAAGCCCGGTGAAAAATGCAATCAAAAAAGATTATGACATCAAAACGCCCTTGTTTTTCCAATTTCCCGGCTACTGCGTGTTGATTATACTTATTTAAGT
ACGACGTATTTG