CANTATAdb - search

Detailed information on CNT30637294

BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-179

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-139

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30500332	Capsicum annuum	Coffea canephora	85.31	84.43	83.99	656	forward
CNT30495034	Capsicum annuum	Olea europaea	84.92	40.86	82.7	653	forward
CNT30505570	Capsicum annuum	Nicotiana attenuata	55.66	22.63	89.02	428	forward
CNT30120117	Capsicum annuum	Citrus clementina	86.22	97.64	82.81	663	forward

Expression of CNT30637294

Peptides detected in this lncRNA

>peptide 1 (45 aa)
AFTLSMVSELSTSKVMVFPVNVLTKICIPPLRRSTRWRVDSFWML*

>peptide 2 (37 aa)
MVSELSTSRVMVFPVNVFTKICIPPLSRSTRWRVDSF*

>peptide 3 (57 aa)
MSLQRSAYHLSAAAPDGGLIPSEYCSQQGYDHPRVAFQQKSTFADLEECPPCPEFLP*

Sequence

>CNT30637294
TTGCTTTCACATTATCGATGGTGTCTGAACTCTCAACCTCCAAGGTGATGGTCTTTCCAGTCAATGTCTTAACGAAAATCTGCATACCACCCCTCAGGCG
CAGCACCAGATGGAGGGTTGATTCCTTCTGGATGTTGTAATCTGCTAGAGTCCTTCCATCCTCAAGCTGTTTCCCGGCAAAAATCAACCTTTGCTGGTCC
GGTGGGATTCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCAATGGTGTCAGAACTCTCCACCTCAAGGGTGATGGTCTTCCCTGTCAATGTCTTTA
CAAAGATCTGCATACCACCTCTCAGCCGCAGCACCAGATGGAGGGTTGATTCCTTCTGAATATTGTAGTCAGCAAGGGTACGACCATCCTCGAGTTGCTT
TCCAGCAAAAATCAACCTTTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGAATTTTTGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCAAGG
GTAATAGTCTTTCCAGTCAAGGTTTTCACAAAGATCTGCATGCCACCACGCAGGCGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAG
CAAGAGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAACCTTTGCTGATCAGGGGGAATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTATC
GATTGTGTCAGAACTCTCAACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAGATTTGCAT