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Detailed information on CNT30637282


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532384Capsicum annuumEucalyptus grandis69.4392.381.861367forward
CNT30615929Capsicum annuumSesamum indicum57.8534.0583.321139forward
CNT30279021Capsicum annuumChenopodium quinoa65.7799.3183.941295forward
CNT30401729Capsicum annuumBeta vulgaris57.4482.5580.371131forward
CNT3097291Capsicum annuumSolanum tuberosum72.6892.9294.061431forward
CNT30145547Capsicum annuumMedicago truncatula69.9869.2581.711378forward
CNT30311152Capsicum annuumCamelina sativa69.4384.7581.351367forward
CNT30623461Capsicum annuumDaucus carota69.4355.0182.221367forward
CNT30432057Capsicum annuumPapaver somniferum65.7780.7482.011295forward
CNT30120580Capsicum annuumCitrus clementina45.7182.4981.78900forward
CNT3050995Capsicum annuumCucumis sativus52.3692.6383.711031forward

Expression of CNT30637282

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVSVLTKICIPPLKRSTKWSVDSFWML*

>peptide 2 (40 aa)
MVSELSTSKVMVFPVNVLTKICIPPLRRSTRWRVDSFWML*

>peptide 3 (37 aa)
MVSELSTSRVMVFPVNVFTKICIPPLSRSTRWRVDSF*

>peptide 4 (57 aa)
MSLQRSAYHLSAAAPDGGLIPSEYCSQQGYDHPRVAFQQKSTFADLEECPPCPEFLP*

>peptide 5 (48 aa)
MECGLFLDVVISKSPPILKLLASKNQTLLVWWNPFFVLDLCFHIIDGV*

>peptide 6 (47 aa)
MKIIVNSSIAKFIPETIVQSTQTQCHQSKTRSLKNIFRPKDRSRNQS*

>peptide 7 (42 aa)
SVNIHWRLSVMRISKLLDKLDSTVRIQANIINKKNIGSRQKR*

Sequence

>CNT30637282
GTTCGGTCAATATACACTGGAGGCTATCAGTTATGAGGATATCTAAATTGTTGGACAAGTTAGATAGCACAGTTCGAATACAGGCCAATATAATCAATAA
GAAAAATATTGGCTCAAGACAAAAAAGATGAGATTGAAATAGGCTAGCCTTCTCTGTCGTGTCTTTGCTTTCTTCCTGCCGATTGATGCCGGAGCAGTGT
GCAATTCCAAATTTGGAAAAGCTAACAGATGGTTAGTAGTTTCAAGTGCTAGAGAATATAAAATATGGTGCTCCAATATAACAAACGAGTATAGTAAGGA
CTAATTGATAAAAAACCATAGCAGGACACATTTGAAAGACCACCTAAATACCATATTTGCATAACGTGGCAAGACCCATCCCTATATTGACTCCCAACCT
GCGCGACCCTTAAAACACAAACGCATTCAATACCAAGGATGAAAATCATAGTAAATAGTAGCATAGCTAAATTTATTCCAGAAACGATAGTTCAAAGCAC
ACAAACACAATGTCACCAAAGCAAAACCAGAAGTCTTAAAAACATCTTTCGACCAAAGGATCGAAGCAGAAACCAGTCATAAGAGCATTAAATTCTCAAA
AGCCACCACGGAGACGAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAATCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAAT
CAGCCTCTGCTGGTCTGGCGGGATACCCTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAGGTGATCGTCTTC
CCAGTCAGCGTCTTGACAAAGATTTGCATTCCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCAAGAGTCCTCC
CATCCTCAAGCTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTTGCTTTCACATTATCGATGGTGTCTGA
ACTCTCAACCTCCAAGGTGATGGTCTTTCCAGTCAATGTCTTAACGAAAATCTGCATACCACCCCTCAGGCGCAGCACCAGATGGAGGGTTGATTCCTTC
TGGATGTTGTAATCTGCTAGAGTCCTTCCATCCTCAAGCTGTTTCCCGGCAAAAATCAACCTTTGCTGGTCCGGTGGGATTCCTTCCTTATCTTGAATTT
TAGCCTTGACATTGTCAATGGTGTCAGAACTCTCCACCTCAAGGGTGATGGTCTTCCCTGTCAATGTCTTTACAAAGATCTGCATACCACCTCTCAGCCG
CAGCACCAGATGGAGGGTTGATTCCTTCTGAATATTGTAGTCAGCAAGGGTACGACCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGATCT
GGAGGAATGCCCTCCTTGTCCTGAATTTTTGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCAAGGGTAATAGTCTTTCCAGTCAAGGTTTTCA
CAAAGATCTGCATGCCACCACGCAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTGCTT
TCCAGCGAAGATCAATCTCTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGA
GTAATTGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCATACCACCACGCAGACGAAGTACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAG
CAAGAGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAACCTTTGCTGATCAGGGGGAATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTATC
GATTGTGTCAGAACTCTCAACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAGATTTGCAT