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Detailed information on CNT30636551


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 1e-123

BLAST vs NONCODE:
NONSLYT002586, E-value = 6e-173

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693909Capsicum annuumOryza sativa24.3911.3780.75161forward
CNT30674978Capsicum annuumSetaria viridis25.9122.9887.13171forward
CNT30640134Capsicum annuumNymphaea colorata44.3942.5981.91293forward
CNT30547471Capsicum annuumIpomoea triloba29.0935.4985.94192forward
CNT30512774Capsicum annuumJuglans regia63.9433.8184.36422forward
CNT30373037Capsicum annuumArabidopsis thaliana29.859.6787.82197forward
CNT3019595Capsicum annuumCitrullus lanatus31.0636.9482.93205forward
CNT30728649Capsicum annuumCorchorus capsularis22.7313.7787.33150forward
CNT3071371Capsicum annuumQuercus suber33.6477.3587.84222forward
CNT30405832Capsicum annuumBeta vulgaris63.6452.3781.19420forward
CNT30192963Capsicum annuumSecale cereale36.3644.9484.17240forward
CNT30224842Capsicum annuumHordeum vulgare45.368.2684.62299forward
CNT3085191Capsicum annuumVigna radiata24.8522.8785.98164forward
CNT30543621Capsicum annuumBrassica napus21.0654.388.49139forward
CNT30510528Capsicum annuumSolanum lycopersicum67.4234.5595.51445forward
CNT30143750Capsicum annuumMedicago truncatula52.2745.0484.06345forward
CNT30441049Capsicum annuumAegilops tauschii45.379.184.95299forward
CNT30665536Capsicum annuumTriticum dicoccoides29.729.7484.69196forward
CNT30312884Capsicum annuumCamelina sativa48.6431.7583.49321forward
CNT30263621Capsicum annuumBrassica rapa63.9435.6784.6422forward
CNT30612508Capsicum annuumArabis alpina45.311.7885.28299forward
CNT30445994Capsicum annuumSaccharum spontaneum63.9429.6382.23422forward
CNT301916Capsicum annuumZea mays34.2455.5382.74226forward
CNT30212259Capsicum annuumHelianthus annuus30.7630.4386.7203forward
CNT30716253Capsicum annuumMalus domestica golden64.2431.9885.85424forward
CNT30352686Capsicum annuumEragrostis tef6.062092.540forward
CNT30479087Capsicum annuumArabidopsis halleri28.1863.9284.95186forward
CNT30361828Capsicum annuumSorghum bicolor42.5854.2582.92281forward
CNT30706279Capsicum annuumPrunus avium64.5570.1883.1426forward
CNT3054398Capsicum annuumAmborella trichopoda27.7326.6880.87183forward
CNT3024028Capsicum annuumPopulus trichocarpa26.6723.8284.66176forward
CNT30119815Capsicum annuumCitrus clementina42.426187.5280forward
CNT30557952Capsicum annuumPanicum hallii34.2427.7384.96226forward

Expression of CNT30636551

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MQSSRESNSTFLRVNLDITKKRILICSHNNIS

>peptide 2 (33 aa)
MILTFIPVLTFPANTRPKAKNLPLSDAGIILDT*

>peptide 3 (50 aa)
MALAYASSRAVLAGSQVCITRFISALPIKSFSSDFMVTPSFCNIGQSLSF*

Sequence

>CNT30636551
CTCTGAATATTCTTAACATATAAATCCTTCTTTTCACCAGGAACATAGTTAGGACCCATGATTCTAACCTTCATACCAGTACTAACCTTCCCAGCGAATA
CACGACCAAAAGCAAAGAATCTACCCTTGTCAGATGCTGGAATCATCTTGGATACATAAAGCATAAGCGGCCCTTCTGGGTCACAGTTCCTGATGGCATT
GGCATACGCATCATCAAGAGCAGTACTTGCGGGAAGCCAGGTCTGCATCACACGCTTCATCAGTGCCTTGCCCATCAAATCTTTTTCATCAGATTTCATG
GTTACACCAAGCTTCTGCAACATTGGCCAGAGTTTATCTTTCTGATCATTCATGCAAGTGTTGATAATCTGCTTGATTGGCTCATAGCAGAACTGAACAA
ACCCACGCTTGCATGAAGCTGTCCCGGTGCTCTTGGTGGTCCACTTTTTGGTGGCAGGGTCAAAAAAGTTCTCACCCCACAGCCTTTCCATCATTTTAGA
CTCGTCAACACCGAATTTGGAAGCATACATCTTGGCAAAATTGGTGAGAGTGAAAGCCCAACCATGCAATCCAGCAGAGAAAGCAACAGTACCTTTCTCA
GGGTAAACCTGGACATCACCAAGAAGAGGATCCTCATATGTAGCCATAATAACATTAGCA