Detailed information on CNT30636104


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-167

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3095105Capsicum annuumSolanum tuberosum75.437986.71918forward
CNT30260967Capsicum annuumBrassica rapa75.3575.684.19917forward
CNT30228911Capsicum annuumAnanas comosus75.2758.8384.06916forward
CNT30623089Capsicum annuumDaucus carota72.3951.0185.02881forward
CNT30174617Capsicum annuumVigna angularis73.3883.3884.55893forward

Expression of CNT30636104

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSELSTSKVMVFPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 2 (44 aa)
MPSLSWIFAFTLSMVSELSTSRVIVFPVRVLTKICIPPRRRRTR*

>peptide 3 (82 aa)
MILLRPSLQTHITTTMGDETEPTRQPPTNRHHLKNHHGDGGQGAEWTPSGYCSQPRSFHPPAAYQQRSTSAGLVEFPPCPES*

>peptide 4 (33 aa)
LHSHILTKEEQKNKKHGSLQTQDTNKRPIFIQI*

>peptide 5 (42 aa)
MVSELSTSKVMVFPVRVFTKICICKQQQTKRSKNEKNSNFKAL

>peptide 6 (30 aa)
MDDPFETIIANTYNHHNGRRNRTNTTTTNK*

Sequence

>CNT30636104
ATCTTCATTCACACATTTTAACCAAAGAGGAACAGAAAAACAAAAAACACGGATCATTGCAAACACAAGACACCAATAAAAGACCAATCTTTATTCAAAT
ATAAAAGAAACACAAGGGAACAGAAACATAAAAAGACATGGATGATCCTTTTGAGACCATCATTGCAAACACATATAACCACCACAATGGGCGACGAAAC
AGAACCAACACGACAACCACCAACAAATAGGCATCATCTTAAAAACCACCACGGAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGT
CAGCCAAGGTCCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGAATCTTAGCCTTCACATT
GTCAATTGTGTCGGAGCTTTCCACCTCGAGAGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATACCACCACGGAGACGTAGGACAAGGTGA
AGGGTGGATTCTTTCTGGATATTATAGTCAGCAAGGGTGCGGCCATCCTCCAACTGTTTTCCTGCAAAAATAAGCCTCTGCTGGTCTGGGGGGATGCCCT
CCTTGTCCTGGATTTTCGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCGAGGGTAATAGTCTTTCCCGTGAGGGTCTTAACAAAAATCTGCAT
ACCACCACGGAGACGGAGGACAAGGTGAAGGGTACTCTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGGCCATCTTCTAGCTGCTTTCCGGCAAATATA
AGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCTATGGTATCTGAGCTTTCCACCTCCAAAGTAATGGTCTTCC
CTGTGAGGGTCTTAACAAAAATCTGCATACCACCGCGAAGACGGAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGACC
GTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTATCTTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAG
CTCTCCACTTCCAAAGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCATCTGCAAACAACAACAAACCAAACGATCAAAAAACGAAAAAAATT
CCAACTTTAAGGCTTTA