Detailed information on CNT30636043


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-156

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-134

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30169884Capsicum annuumPistacia vera43.7969.384.36684forward
CNT30510145Capsicum annuumSolanum lycopersicum44.6949.0287.11698forward
CNT30171188Capsicum annuumTrifolium pratense44.5644.4484.05696forward
CNT3074551Capsicum annuumBrassica juncea44.1176.1385.34689forward
CNT30613113Capsicum annuumArabis alpina44.1174.9784.62689forward

Expression of CNT30636043

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDDPFETIIANTYNHHNGRRNRTNTTTTNK*

>peptide 2 (30 aa)
HILTKEEQKNKKHGSLQTQDTNKRPIFIQI*

>peptide 3 (29 aa)
MEKKPSNFSPSSAPPKQLDKKSRLFNSER*

>peptide 4 (86 aa)
MVSELSTSKVMVFPVRVFTKICICKQQQTKRSKNEKNSNFKALSTLNEKLNYLTIKNNEKNSNFSVYSNPKDETELNNQSNGKLKL*

>peptide 5 (82 aa)
MILLRPSLQTHITTTMGDETEPTRQPPTNRHHLKNHHGDGGQGAEWTPSGYCSQPRSFHPPAAYQQRSTSAGLVEFPPCPES*

>peptide 6 (71 aa)
MKKTQAFPDPKQWKKNPQILALLQLLPNNWIKNRAYSTPKDEIKLLYNQNNEKNQIIRPFQLQTMKKKLTF*

>peptide 7 (53 aa)
MPSLSWILALTLSMVSELSTSKVMVFPVRVLTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30636043
CACACATTTTAACCAAAGAGGAACAGAAAAACAAAAAACACGGATCATTGCAAACACAAGACACCAATAAAAGACCAATCTTTATTCAAATATAAAAGAA
ACACAAGGGAACAGAAACATAAAAAGACATGGATGATCCTTTTGAGACCATCATTGCAAACACATATAACCACCACAATGGGCGACGAAACAGAACCAAC
ACGACAACCACCAACAAATAGGCATCATCTTAAAAACCACCACGGAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGCCAAGG
TCCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATTGT
GTCGGAGCTTTCCACCTCGAGAGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATACCACCACGGAGACGTAGGACAAGGTGAAGGGTACTC
TCCTTCTGGATGTTGTAGTCCGCGAGGGTACGGCCATCTTCTAGCTGCTTTCCGGCAAATATAAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCT
GGATCTTGGCCTTGACGTTGTCTATGGTATCTGAGCTTTCCACCTCCAAAGTAATGGTCTTCCCTGTGAGGGTCTTAACAAAAATCTGCATACCACCGCG
AAGACGGAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGC
TGGTCTGGGGGGATTCCCTCCTTATCTTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCCACTTCCAAAGTGATGGTCTTTCCGGTGAGAG
TTTTCACAAAGATCTGCATCTGCAAACAACAACAAACCAAACGATCAAAAAACGAAAAAAATTCCAACTTTAAGGCTTTATCAACCCTAAACGAGAAATT
AAACTATTTAACAATCAAAAACAACGAAAAAAACTCAAATTTTAGCGTTTATTCAAATCCGAAAGATGAAACTGAACTTAACAATCAAAGCAACGGAAAA
CTCAAATTATAGGGCTTGTTAAGCTCCCATACAATGAAAAAAACACAAGCTTTTCCAGATCCAAAACAATGGAAAAAAAACCCTCAAATTTTAGCCCTTC
TTCAGCTCCTCCCAAACAATTGGATAAAAAATCGCGCTTATTCAACTCCGAAAGATGAAATTAAACTACTTTACAATCAAAACAACGAAAAAAATCAAAT
TATAAGACCTTTTCAACTCCAAACAATGAAAAAAAAACTCACATTTTAGGGCCTTTTCAGCTTAAAACAAATTGGAAAAAAAAAAAAAAAACTCAATTTT
AGAGGGCTTTTTCAGCTCCGAAACGATCGAAAAAAACTCAAATTCTAGGGCTATTTCAGCACCCAAAATAACAAATTAAAAAAACAAAAACAAAACATTG
ATGAAAATTTCTAACCTTGAACGAGAAATTTGAAGGCAATTGAGAGAGATTATGAAGAAAAT