Detailed information on CNT30635987


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 4e-156

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-133

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513318Capsicum annuumJuglans regia42.3667.2285.69685forward
CNT30630785Capsicum annuumVigna unguiculata42.5580.6685.32688forward
CNT30171036Capsicum annuumTrifolium pratense43.0444.4484.05696forward

Expression of CNT30635987

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MVSELSTSKVMVFPVRVFTKICICKQQQTKRSKNEKNSNFKALSTLNEKLNYLTIKNNEKNSNFSVYSNPKDETELNNQSNGKLKL*

>peptide 2 (47 aa)
KTRQLPYEEKLRPNLHSHILTKEEQKNKKHGSLQTQDTNKRPIFIQI*

>peptide 3 (45 aa)
MILLRPSLQTHITTTMGDETEPTRQPPTNRHHLKNHHGDGGQGEG*

>peptide 4 (71 aa)
MKKTQAFPDPKQWKKNPQILALLQLLPNNWIKNRAYSTPKDEIKLLYNQNNEKNQIIRPFQLQTMKKKLTF*

>peptide 5 (53 aa)
MPSLSWILALTLSMVSELSTSKVMVFPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 6 (30 aa)
MDDPFETIIANTYNHHNGRRNRTNTTTTNK*

>peptide 7 (31 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRRTR*

>peptide 8 (29 aa)
MEKKPSNFSPSSAPPKQLDKKSRLFNSER*

Sequence

>CNT30635987
AAAAAACTCGTCAACTGCCATATGAAGAGAAACTAAGACCAAATCTTCATTCACACATTTTAACCAAAGAGGAACAGAAAAACAAAAAACACGGATCATT
GCAAACACAAGACACCAATAAAAGACCAATCTTTATTCAAATATAAAAGAAACACAAGGGAACAGAAACATAAAAAGACATGGATGATCCTTTTGAGACC
ATCATTGCAAACACATATAACCACCACAATGGGCGACGAAACAGAACCAACACGACAACCACCAACAAATAGGCATCATCTTAAAAACCACCACGGAGAC
GGAGGACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGCCCATCCTCGAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGATC
TGGGGGAATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGGGTAATGGTCTTCCCAGTGAGGGTCTTG
ACAAAGATCTGCATACCACCACGGAGACGGAGAACAAGGTGAAGGGTACTCTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGGCCATCTTCTAGCTGCT
TTCCGGCAAATATAAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCTATGGTATCTGAGCTTTCCACCTCCAA
AGTAATGGTCTTCCCTGTGAGGGTCTTAACAAAAATCTGCATACCACCGCGAAGACGGAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCA
GCTAGAGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTATCTTGAATCTTGGCCTTGACATTGT
CGATGGTGTCGGAGCTCTCCACTTCCAAAGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCATCTGCAAACAACAACAAACCAAACGATCAAA
AAACGAAAAAAATTCCAACTTTAAGGCTTTATCAACCCTAAACGAGAAATTAAACTATTTAACAATCAAAAACAACGAAAAAAACTCAAATTTTAGCGTT
TATTCAAATCCGAAAGATGAAACTGAACTTAACAATCAAAGCAACGGAAAACTCAAATTATAGGGCTTGTTAAGCTCCCATACAATGAAAAAAACACAAG
CTTTTCCAGATCCAAAACAATGGAAAAAAAACCCTCAAATTTTAGCCCTTCTTCAGCTCCTCCCAAACAATTGGATAAAAAATCGCGCTTATTCAACTCC
GAAAGATGAAATTAAACTACTTTACAATCAAAACAACGAAAAAAATCAAATTATAAGACCTTTTCAACTCCAAACAATGAAAAAAAAACTCACATTTTAG
GGCCTTTTCAGCTTAAAACAAATTGGAAAAAAAAAAAAAAAACTCAATTTTAGAGGGCTTTTTCAGCTCCGAAACGATCGAAAAAAACTCAAATTCTAGG
GCTATTTCAGCACCCAAAATAACAAATTAAAAAAACAAAAACAAAACATTGATGAAAATTTCTAACCTTGAACGAGAAATTTGAAGGCAATTGAGAGAGA
TTATGAAGAAAATAATT