Detailed information on CNT30635976


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT000402, E-value = 7e-97

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532270Capsicum annuumEucalyptus grandis38.9650.6391.67120forward
CNT30374346Capsicum annuumArabidopsis thaliana94.817.586.99292reverse complement
CNT30655393Capsicum annuumRosa chinensis93.5143.3788.19288forward
CNT30574572Capsicum annuumVitis vinifera81.493.7396.41251reverse complement
CNT3054520Capsicum annuumAmborella trichopoda23.0525.8291.5571forward

Expression of CNT30635976

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKKVDKTDSHFSSNKYRKRIILKMLLTQPL

Sequence

>CNT30635976
CTTCGCCCAGGCTTAACGGGGCCTTAATTATTCAGGGGGGAGAGTAGAGCCTCGAAAAGCACTGTTGAGAGGAAGATCCTTGGCCCCTCTTCATTCTCTA
CAGGGTTCCAAACCTTTCTTCAACATAGGTGACAACGAGCCAGGCAGAGATGGAAGAGATCAAACACGGGAATAAGAAGCAAGCTCGCCTTCCTTTTTGA
TCATTTTGATAGAGGGGGATGAAGAAAGTGGACAAAACAGACTCGCATTTCTCATCGAACAAATACAGGAAAAGAATCATATTGAAAATGCTCCTAACCC
AACCCCTT