Detailed information on CNT30635928


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000089, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30506309Capsicum annuumNicotiana attenuata93.8980.7493.98415reverse complement
CNT30229743Capsicum annuumAnanas comosus13.5725.4288.3360forward
CNT30705533Capsicum annuumPrunus avium29.191585.27129reverse complement

Expression of CNT30635928

Peptides detected in this lncRNA

>peptide 1 (48 aa)
CPKFFNKKSFRGRIFTLSIPVSFVGLTRDFSDLRIHELIYGSFRPSDQ*

>peptide 2 (31 aa)
MELRMKLVLESIFXVFIGSKLLIFCSISIFL*

Sequence

>CNT30635928
ATTGTCCTAAATTTTTCAATAAAAAAAGTTTTCGCGGGCGAATATTTACTCTTTCAATCCCTGTTTCATTTGTAGGGTTAACTCGTGATTTCTCAGATCT
CAGAATACATGAATTAATCTATGGTTCGTTCCGCCCTTCTGACCAGTGAATCATTAAGATTCCTTGTTCAATAGAATCTTTTGCATTCACAAGTTCCGTC
GTTCCCATCACTTCTGACTTAATGGTTAGGTCCGAATTCTACAATGGAGCTCAGAATGAAATTGGTTCTTGAGTCAATCTTCTNTGTCTTTATTGGCTCG
AAGCTCTTGATTTTTTGTTCTATTTCTATATTTCTATAAAGAAGATTCTTTTTATTATGGTATGAATGCATATTGATGCTTTATTACACTGCCTTTCATG
AGATTACTCATAGACCTTACATATTGGAATTTTATATTATTG