Detailed information on CNT30635771


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619235Capsicum annuumSesamum indicum47.786.9695.35172forward
CNT30592641Capsicum annuumMusa acuminata50.282.6990.06181forward
CNT30510807Capsicum annuumSolanum lycopersicum32.53.8582.91117reverse complement
CNT30147428Capsicum annuumMedicago truncatula50.8323.7791.26183reverse complement
CNT30609506Capsicum annuumGossypium raimondii42.7831.6995.45154reverse complement
CNT30721405Capsicum annuumTriticum spelta46.3971.0691.02167forward
CNT30354707Capsicum annuumLactuca sativa35.5612.9496.88128forward
CNT30431658Capsicum annuumPapaver somniferum50.8311.5390.16183forward

Expression of CNT30635771

Peptides detected in this lncRNA

>peptide 1 (55 aa)
SPKKERADPIEDESEVQQGHVCPPPFSRSHTWTLLLIQLPASKQLAFLYKEWKCG*

>peptide 2 (44 aa)
LPKKKEQTPLKTRVRYNKAMSVHRPSHGAIRGRYCSYSSQPASS*

Sequence

>CNT30635771
CTCTCCCAAAAAAGAAAGAGCAGACCCCATTGAAGACGAGAGTGAGGTACAACAAGGCCATGTCTGTCCACCGCCCTTCTCACGGAGCCATACGTGGACG
TTACTGCTCATACAGCTCCCAGCCAGCAAGCAGTTAGCCTTCCTCTACAAGGAATGGAAGTGTGGATGAATCGACATCAAATATAGATTTTTGTTGTACA
CGATATCCATTTTTTTAGTCCTAGCTATCCACTCCACTATGTGGTAGAGTGTTCGTCCCAACCCCTTCGCAGGGGTACCTTCCCTTTTAATTGAGAGAAG
GACTCGGAATTGACTCCCCTTGACTCGAGATCCGAAAGAAGGGTATGGAGTTTCTCCAAG