Detailed information on CNT30635730


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512572Capsicum annuumJuglans regia37.0932.2578.99257forward
CNT30617718Capsicum annuumSesamum indicum40.5520.5479.72281forward
CNT30380980Capsicum annuumManihot esculenta38.8230.7481.04269forward
CNT3094104Capsicum annuumSolanum tuberosum33.4839.5992.24232forward
CNT30120137Capsicum annuumCitrus clementina41.8532.8884.14290forward
CNT30725668Capsicum annuumLupinus angustifolius20.6317.582.52143forward

Expression of CNT30635730

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLLAIQPQLSSFPQQSSVPLQAESPSSSCSMLLISQLLLPS*

>peptide 2 (48 aa)
MVDDEVIKALEELIIIMLAMASFVLRDFEVIIVFYLLYFFCERVCLDC*

>peptide 3 (63 aa)
KNLLDNLITKSSNLRIKTLNSLLLLTLQTSQCFLQFSLNSLPSLSNLLFHFKLSLLLHLVQCC*

>peptide 4 (37 aa)
MARELARMTEMVLRFDGRVRGLWDLGDLGRGSFGKGI*

Sequence

>CNT30635730
GGAAGAACCTTCTTGACAATCTCATCACTAAGAGCAGCAATCTGAGAATCAAGACTCTTAATAGTCTCCTCCTTTTGACTCTCCAAACTAGCCAATGCTT
CTTGCAATTCAGCCTCAACTCTCTTCCTTCCCTCAGCAATCTTCTGTTCCACTTCAAGCTGAGTCTCCTTCTTCATCTTGTTCAATGCTGCTGATATCTC
AGCTCTTGCTGCCTTCATAATAGCAGCAGCTTGGTCTTCCAGTTGCTTCACTTCAACAGAAGTGTCCTTCACACTGTTGAGTTTCTCCTTAATGGGAGTG
TTAAGTTGAAGTCAAAAAGAGAAGCTTTTTCAATTTCTTCAGCAAGTGAAGGTGGTGCTATGGCTAGGGAGCTTGCAAGAATGACTGAAATGGTGTTGAG
ATTTGATGGGAGGGTAAGGGGTTTGTGGGATTTAGGTGATTTAGGGAGGGGTAGTTTTGGAAAAGGGATTTGAGCGAGGGAAAGTTTGAATCTTGGAGAT
GGTGGGATGGTGGATGATGAAGTGATTAAGGCTTTGGAAGAGCTCATCATCATCATGTTGGCCATGGCTTCTTTTGTTTTGAGGGATTTTGAGGTGATAA
TTGTTTTTTATCTTCTTTATTTTTTTTGTGAGAGGGTTTGTTTGGATTGTTGATTTTGTTGGTGTTTGAGAAGGGGGAGAGAAGGAAGATCTT