Detailed information on CNT30634641


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H1E4|RAP24_ARATH, E-value = 6e-46

BLAST vs NONCODE:
NONMEST003434, E-value = 5e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30401699Capsicum annuumBeta vulgaris8.2722.2684.18177forward
CNT30488421Capsicum annuumOlea europaea7.3835.9982.28158forward
CNT30708948Capsicum annuumGlycine max8.5533.5280.87183forward
CNT30563605Capsicum annuumActinidia chinensis6.9131.2982.43148forward
CNT30509412Capsicum annuumSolanum lycopersicum3.2234.1691.369reverse complement

Expression of CNT30634641

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MSFNLASTEECNGLYSPKLWRRWEKFSLAKSPRSI*

>peptide 2 (36 aa)
MVVVRHHLLLLLLLDLKVDLSLNLLDLCWCQLIQPN*

>peptide 3 (36 aa)
MAKISLSRLCKQEEDHELDEVRCKHGHLLSLMTSWT*

>peptide 4 (74 aa)
MVDDKTTRITKSVENKIDMNKIQLQMDNFQDDLKMMKANEKKWKIKLANSKKRKKQLWTTLIFWVLVFYFNSCS*

>peptide 5 (57 aa)
MLDHAIFVFGRMILLMNDRNLLFLNCWEESRSLRKELNLRQTVHFMNTKWLMTRLLG*

>peptide 6 (98 aa)
MFHVDSSSVNSGKISSVTGDDSPDAEPDPSLSDPPSTTLLSPSSILTTPAAVAAEAXXXXXXXXXXXXXXXXXXXXXCRGRCRPFGFLLLRVNTLPLC*

>peptide 7 (77 aa)
MQWIVLTKVVAEMGEVQPSKVTTKHISRLVVSQSSFFSSVEGTKPKTGSVLGQSDLSNPLSPVTLSDASVELSGLWW*

Sequence

>CNT30634641
TGACACTAAAATGAAAAGACTACAACCATGACAAAGCATCAAATCCACTGGCCTAGCCAAGACAAAAAACATGACCAAACCAGTTACGATTTTTAACCTA
AAAACAAGAAAGGAACTTGCCCTGCAATTGCCAAAAACTCCATTGCAGTGACCGACTGTTCCCTGACCTAAACACCTAGAAACACCATTAACAATTACTA
TAAACAATGCAAAAATACAAAGGACCTCTTGGACCTAAAACTTAATAATAGCTAATAATATGTTTTTTTTTTCCTTATATAGAAGCCCAATCTATCTCAG
ATGGATACTTCTGCAACAAGAAATTTTCAGACATGTTCCATGTTGATTCTTCCTCGGTGAACTCTGGAAAAATCAGTTCAGTTACCGGTGATGATTCACC
TGACGCGGAACCCGACCCGTCACTTTCGGATCCACCTTCAACAACTTTGCTCTCTCCTTCCTCCATCTTAACTACCCCTGCAGCTGTAGCTGCCGAGGCC
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCGAGGCCGATGCCGACCCTTTGGTTTTCTTCTTC
TTAGAGTCAATACTCTTCCCTTGTGCTAAGCTTTGACATATGTCCTTTAACTTAGCATCAACGGAAGAATGCAATGGATTGTACTCACCAAAGTTGTGGC
GGAGATGGGAGAAGTTCAGCCTAGCAAAGTCACCACGAAGCATATAAGCCGCCTTGTCGTAAGCCAAAGCAGCTTCTTCAGCAGTGTCGAAGGTACCAAG
CCAAAGACGGGTTCGGTTCTTGGGCAATCTGATCTCAGCAACCCACTTTCCCCAGTGACGTTGTCTGACGCCTCTGTAGAGCTTAGTGGGCTTTGGTGGT
GATCCAGATTGCTTCATGTGAACCGGTTTCGGGGCCAAGAAGTTCATGGTAGAAGAAGCATGGTGGTGGTACGACATCATCTGCTGCTGTTGTTGTTGCT
GGATCTGAAAGTTGATCTGAGCTTGAATCTGCTCGATCTGTGTTGGTGTCAACTGATTCAACCCAATTGAACTCGATTGTTGATCCATTCCGTAACTGGA
AAACCCTGTTGAAAAGATTTGGGAATTCATTTCCGTGGAAGTGGAACAATCATCAGAAGGTTGAACGGTAGGGTAAAAGGAAGAAGTGTAGGGATAAGAA
ATGGGATTAGGAGGAGGAGGAGGAAAAGAAGGAAAAGATTGAAGATCTGAAGAAGGAGAAGAGAAAATAGGAGGAAAGTTAACAGGAGAAGTAGAAGGAG
GAGAAACACTTTTCATAAATGGTTCAAGTGCTTCCATAAGTTCACCACCAGAAGTAACTGGATCTGATGATAATTGAAGATCTAAAGGTACTTTAATGGC
TAAGATAAGTTTGAGTAGACTTTGTAAGCAAGAAGAAGATCATGAGTTGGATGAGGTTCGATGCAAACATGGACATCTTTTGTCTTTGATGACTTCATGG
ACCTAAAGAAATTCGGGTAGACGATATTGGACTTGTCCTTGCTATGGGGTAATTGAGTTTTTCCTTCAAACATTGATCTTGAAAAGTGTATACAAATCTA
ATTCCTTTCATTTTAGAATGCTAGATCATGCGATTTTTGTCTTTGGAAGAATGATTTTATTAATGAATGATCGAAATTTGTTATTCCTAAATTGTTGGGA
AGAATCGAGGAGCTTGAGAAAAGAGTTGAATCTTCGACAAACTGTGCATTTTATGAACACAAAATGGTTGATGACAAGACTACTAGGATAACCAAGTCTG
TGGAGAACAAAATAGACATGAATAAAATACAGTTGCAAATGGACAATTTTCAGGATGATTTGAAGATGATGAAGGCAAATGAGAAGAAATGGAAGATCAA
GTTGGCTAATTCTAAGAAAAGGAAAAAACAACTTTGGACTACTCTCATATTTTGGGTGTTAGTTTTCTATTTCAATTCATGTTCTTGAAAGGAGATCCAA
GAAGGCTGCCCTAAACTAAGTTACTTTATTTTTGTTATGTTTTAAGAGGCTGCAATTTGTATCAATTATTAGATGTTACCTTAGACAAAACTGTCAGGTT
GTGTAATTAAATTGTTGTGTAATGAAATTGCAAAGTTGAAC