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Detailed information on CNT30634223


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547627Capsicum annuumIpomoea triloba21.586.2390.4863forward
CNT30700605Capsicum annuumQuercus lobata30.4817.7385.3989forward
CNT30372997Capsicum annuumArabidopsis thaliana21.588.6988.8963reverse complement
CNT30501219Capsicum annuumCoffea canephora30.1427.7685.2388forward
CNT30618209Capsicum annuumSesamum indicum23.9711.159070forward
CNT30272829Capsicum annuumChenopodium quinoa29.1127.6988.2485reverse complement
CNT3070208Capsicum annuumQuercus suber26.3730.285.7177forward
CNT30406606Capsicum annuumBeta vulgaris26.0324.688.1676reverse complement
CNT30503735Capsicum annuumNicotiana attenuata96.5893.0786.17282reverse complement
CNT3045640Capsicum annuumPrunus dulcis24.3223.0588.7371reverse complement
CNT3095958Capsicum annuumSolanum tuberosum98.6395.0589.58288reverse complement
CNT30541676Capsicum annuumBrassica napus26.0324.9286.8476reverse complement
CNT30510805Capsicum annuumSolanum lycopersicum10095.7485.62292reverse complement
CNT3059454Capsicum annuumArabidopsis lyrata21.5820.7988.8963reverse complement
CNT3081558Capsicum annuumBrassica juncea26.719.7485.978forward
CNT30261678Capsicum annuumBrassica rapa19.8624.5889.6658reverse complement
CNT30652801Capsicum annuumRosa chinensis25.6824.518875reverse complement
CNT30714740Capsicum annuumMalus domestica golden24.3223.0587.3271reverse complement
CNT30477933Capsicum annuumArabidopsis halleri21.5820.7988.8963reverse complement
CNT30154450Capsicum annuumPrunus persica25.3424.2686.4974reverse complement
CNT30410045Capsicum annuumPapaver somniferum21.5821.2892.0663forward
CNT3029804Capsicum annuumTheobroma cacao27.7426.3887.6581reverse complement
CNT3058191Capsicum annuumAmborella trichopoda23.9722.887.1470reverse complement
CNT3024649Capsicum annuumPopulus trichocarpa25.3424.589.1974reverse complement

Expression of CNT30634223

Peptides detected in this lncRNA

>peptide 1 (58 aa)
KKWWFNWSSPSGVTELERHQPVILPLHRAGAVRCSVKPASRSPPHFRDQEAFSFDKAP*

Sequence

>CNT30634223
CAAAAAGTGGTGGTTTAATTGGAGCAGCCCATCAGGTGTTACTGAACTTGAAAGGCACCAACCTGTAATCCTTCCACTGCACAGAGCGGGAGCTGTTCGT
TGCTCTGTGAAACCAGCCTCACGCAGTCCACCCCACTTTAGGGATCAAGAAGCCTTTTCTTTCGACAAGGCCCCGTGATCCAACTCTGTGCTTGGATAGG
GCAGGCCAGAAACTGGCCCACCAAGCCCAACCATCAGGGACAGCCCTACATTCCACCACATCAATGCCCTCACTTGAGTTACAAGCCCACGC