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Detailed information on CNT30633494


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 3e-177

BLAST vs NONCODE:
NONSTUT001352, E-value = 1e-147

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316082Capsicum annuumCorylus avellana71.9969.1984.95658forward
CNT30500907Capsicum annuumCoffea canephora72.5470.8387.93663forward
CNT30728214Capsicum annuumCorchorus capsularis46.550.4885.65425forward
CNT30525395Capsicum annuumPhaseolus vulgaris77.1369.1983.4705forward
CNT30504491Capsicum annuumNicotiana attenuata97.9294.4191.73895forward
CNT30709059Capsicum annuumGlycine max47.268086.34432forward
CNT3046618Capsicum annuumPrunus dulcis72.6579.4382.38664forward
CNT30609649Capsicum annuumGossypium raimondii6477.2886.15585forward
CNT30621493Capsicum annuumCajanus cajan71.7748.8884.6656forward
CNT30153357Capsicum annuumPrunus persica71.9937.2682.83658forward
CNT30119285Capsicum annuumCitrus clementina68.8270.3686.17629forward

Expression of CNT30633494

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MDQAWVAQVVKSTLAEYLGSSLEPHSLTKLDTITGQELGENTSKSTKHSPSAVDHLEFTVLGKGFRVC*

>peptide 2 (67 aa)
MPLDHQQDLMGQSCHQGTMGRLPHQEAHQQYGNLQRLPSRQLGKPRWPRCSVHGPSLGCPSSQVHPR*

>peptide 3 (49 aa)
MEILPFPEISESDGESFTACPAKEGEERAIVAAAMVYKEESEGVTSLICQ

>peptide 4 (39 aa)
MRLAWRQSFSWRSFHFQRFLSQMVRASLPVRQKKGKKEP*

Sequence

>CNT30633494
AAGTAAACTCACAACTACAACTTTACAAGGGCATCAAACAATGAAATTTTAATATTGTTTTACGATATTCATTTTCCGGGGACAAAGTTTGTGGCGTAGG
CCCATGCGTTGTTGTTAACTGGATCTGCAAGGTGGTCAGCAAGGTTCTCCAATGGACCCTTTCCTGTAACAATGGCCTGAACAAAGAATCCAAACATAGA
GAACATAGCAAGTCTACCGTTCTTGATCTCCTTTACCTTGAGCTCAGCAAATGCCTCTGGATCATCAGCAAGACCTAATGGGTCAAAGCTGCCACCAGGG
TACAATGGGTCGACTACCTCACCAAGAGGCCCACCAGCAATACGGTAACCTTCAACGGCTCCCATCAAGACAACTTGGCAAGCCCAGATGGCCAAGATGC
TCTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAATATCTGGGATCCAGCCTTGAACCACACAGCCTCACCAAACTTGAC
ACCATTACGGGCCAAGAGCTCGGGGAAAACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCGAGTTCACGGTTCTTGGCAAAGGTT
TCAGGGTCTGCTGAAAGTCCAGCGGTATCCCACCCATAGTCACCAGGGAATTCACCAGTCAAGTAGCTTGGGGGCTCACCAGAGAATGGGCCCAAGTACT
TAACACGGTCTGGACCATACCATGGGCTGCTAGATGCGGCTGGCTTGGAGGCAGTCTTTCTCATGGAGATCCTTCCATTTCCAGAGATTTCTGAGTCAGA
TGGTGAGAGCTTCACTGCCTGTCCGGCAAAAGAAGGGGAAGAAAGAGCCATAGTAGCAGCTGCCATGGTTTATAAAGAGGAAAGTGAGGGGGTTACTAGT
TTGATATGTCAAAG