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Detailed information on CNT30632595


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000300, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30120918Vigna unguiculataCitrus clementina61.4710096.55753forward

Expression of CNT30632595

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PASSHMLVSKIKPCMCKYELIQTVKLRMAH*

>peptide 2 (36 aa)
MITRRIARPLCRRHIIQISALSTFDGRIVAYHGGDG*

>peptide 3 (44 aa)
MHLLDKRSTQALPVALMIHDNSSDRTAFVPATHHSNFCPINFRW*

>peptide 4 (63 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIENESWSVHHGIAKWLGGEFCEKMKFV

Sequence

>CNT30632595
ATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAG
TTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTA
GATAAAAGGTCGACGCAGGCTCTGCCTGTTGCTTTGATGATTCATGATAACTCGTCGGATCGCACGGCCTTTGTGCCGGCGACACATCATTCAAATTTCT
GCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCT
ACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAAT
TGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG
TTGTTGCAGTGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAAT
CTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAA
AGCTCGTAGTTGGACCTTGGGTTGGGTCGATCGGTCCGCCTCTGGTGTGCACCGGTCTGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGG
CCGGGTCGTGCCTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGATAACACCACAGGATTCT
GATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGA
AAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCGAGAACGAAAGTTGGTCGGTGCACCACGGCATAGCTAAATGGCTTGGTGGGGA
GTTTTGTGAAAAAATGAAATTCGTG