Detailed information on CNT30632461


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONATHT002216, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30312051Vigna unguiculataCamelina sativa28.0727.6693.021446reverse complement

Expression of CNT30632461

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MQMCIEVKVGFPRGIPRGWFKTKLIAKSLVINGG*

>peptide 2 (36 aa)
MACLGTCVLRASACGLPIRPVLKHGPRSLTCVRVNG*

>peptide 3 (40 aa)
MNRKLGYGAELRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 4 (36 aa)
MITRRIARPLCRRHIIQISALSTFDGRIVAYHGGDG*

>peptide 5 (39 aa)
MFCKSRLTYCFSPVGGVEVGSDHLCQVRGQKDWDAVEFV*

>peptide 6 (46 aa)
MLKKTLLSRPQVRRGYPLSLSISISGGKETNKDSPSNGERTGNSPS*

>peptide 7 (47 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLNSYVEVTFHGQLLRGTMAA*

>peptide 8 (40 aa)
MQPQSGGKFRPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 9 (44 aa)
MHLLDKRSTQALPVALMIHDNSSDRTAFVPATHHSNFCPINFRW*

>peptide 10 (44 aa)
WKQGEAPLELRILWTLGLLEARGGPARTPNTMDSWVVGNDNLGG*

>peptide 11 (33 aa)
MCLGRMWNGESRSADRLEALIDADCDGGPSPGC*

>peptide 12 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 13 (51 aa)
MRIVTVAQARAVEMLVETSSLRLWTAVRASWRVSARACSGHRLVGSPFGPS*

>peptide 14 (62 aa)
MRIDRLRCSNCSLEKRPQWRTGPNPLEGGAREGESPVVPGPCRTTRRCRRVGLFGNAAPIGR*

>peptide 15 (60 aa)
MINRDSRGHSYFIVRVKKLVVGPWVGSIGPPLVCTGLLVPSAGDALLALTGRVVPPVLLL*

>peptide 16 (54 aa)
MTPCPSCLWRVLCLVVSYECYLVDPASSHMLVSKIKPCMCKYELIQTVKLRMAH*

>peptide 17 (32 aa)
MKNVAKCDTWCELQNPVNHRVFERKLRLKPLG*

>peptide 18 (30 aa)
MCASQRVSKLVRRKEADWWDPLVGCTADRP*

>peptide 19 (33 aa)
MPTRDQRMLLLGLRWHLMRNQSLWVPGGVWSQG*

Sequence

>CNT30632461
TTGGAAGCAAGGGGAGGCCCCGCTAGAACTCCGAATACTATGGACTCTTGGGTTGTTGGAAGCAAGGGGAGGCCCCGCTAGAACTCCGAATACTATGGAC
TCTTGGGTTGTTGGCAACGACAACTTGGGGGGATGACACTGGAAAAGAGTGAACTAGGCCAAACTGCGAACAAGGCAACTTGGGGGGATGACACTGGAAA
AGAGTGAACTAGGCCAAACTGCGAACAAGGCAACTTGGGGGGATGATGCTGGAAAAGAGTGAACTAGACCGAACTGCGAACAAGGCAACTTGGGGGGATG
ACACTGGAAAAGAGTGAACTAGGCCGAACTGCGAACAAGGCAACTTGGGGGGATGACGCTGGAAAAGAGTGAACTTGGCCAAACTGCGTGAAGGCAACTT
GGGGGGATGAAGTTGGAAAAGAGCGAAGCTTAGCCGAACTGTGAAGAAGGCAACTTGGAGGGATGACGTTGGAAAAGAGGGATGTTCTGCAAGTCACGTT
TGACATATTGCTTTTCCCCCGTGGGTGGTGTGGAAGTTGGGTCTGATCACCTGTGTCAAGTGCGAGGTCAGAAAGATTGGGATGCCGTCGAATTTGTATG
ACGAATGACACCTTGCCCTTCATGCTTATGGCGTGTTTTGTGCTTGGTTGTCAGCTACGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTC
TCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACT
ACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCAGGCTCTGCC
TGTTGCTTTGATGATTCATGATAACTCGTCGGATCGCACGGCCTTTGTGCCGGCGACACATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGAT
AGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCG
CGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTT
AACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTT
GGACCTTGGGTTGGGTCGATCGGTCCGCCTCTGGTGTGCACCGGTCTGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGC
CTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGATAACACCACAGGATTCTGATCCTATTGT
GTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGTTAAAAAGCTCGTAGTTGGACCTTGGGTTGGG
TCGATCGGTCCGCCTCTGGTGTGCACCGGTCTGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGTGCTGTTAC
TTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGATAACACCACAGGATTCTGATCCTATTGTGTTGGCCTTCGGGAT
CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTG
CCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCAGC
GGATGTTGCTTTTAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGAC
GGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTC
TTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAAATA
GCTATGTGGAGGTAACCTTCCACGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGA
TGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATA
GATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCG
CTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATTGCGGCGACGTGGGCGGTTCGCTGCCTGCGACGTGGTGAGAAGTCCACTGAACCTTATCATTT
AGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTTGCCTCGCTCAACCAATCCGACTAGGGAATTGATTCATC
CATGCCTTAACTGTTGGGAGAGCTTGTGTTATGTCATTTGGATTTGGCGCAACCTCTCTCGACAAAAATTAAACCCCGGCGCTTCATTCGCCAAGGATTG
TGTACCTTTTTGGTTGGTCGACTCTCAGGGAAATTTTCCCTTGGAATCGCCATGTAATGTCATGAAATGACTCTCGGCAACGGATATCTCGGCTCTTGCA
TCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTGAAGCCATTAGGTT
GAGGGCACGCCTGCCTGGGTGTCACACATTGTCACCCCAATGCAAATGTGCATTGAGGTGAAAGTTGGCTTCCCGCGAGGCATTCCTCGTGGTTGGTTCA
AAACGAAGTTAATCGCGAAGTCCCTCGTCATAAATGGTGGATGAGTAAATCTCGAGACCAATCGTGACTGTGGTGCTTTGGGGATGTAATTGGTTGGCTC
TGTTGTGTTTTGTGTTCATGTTGAAGAAGACGCTTTTATCGAGACCTCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAA
AGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCATCATGAGAATCGATCGCCTTCGGTGTTCGAATTGTAGTCTGGAGAAGC
GTCCTCAGTGGCGGACCGGGCCCAATCCCCTGGAAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCG
GCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGTGAGAGACCGATAGCGAACAAGTACCGCGAGGG
AAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGTCTCGGTCGGATGTGGAAC
GGTGAAAGCCGGTCTGCCGATCGACTCGAGGCATTGATCGATGCGGATTGTGACGGTGGCCCAAGCCCGGGCTGTTGAAATGCTCGTGGAGACGTCATCG
TTGCGATTGTGGACGGCAGTGCGCGCCTCATGGCGTGTCTCGGCACGTGCGTGCTCCGGGCATCGGCTTGTGGGCTCCCCATTCGGCCCGTCTTGAAACA
CGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACTCGTAAGGCGCAAGGAAGCTGATTGGTGGGATCCCCTTGTGGGTTGCACCGCCG
ACCGACCCTGATCATATGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACT
CTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCG
AAGTTTCCCTCAGGATAGCTGGAGCCCGCGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAA
CTTTAAATAGGTAGGACGGCACGGCTGCTCTGTTGAGCCGTGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGG
ATGAACCGGAAGCTGGGTTACGGTGCCGAACTGCGCGCTAACCTAGACCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTC
GAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTAAAGCGCGCGACCTATACCCGGCCGTCGGGGCA
AGTACCAAGCCTCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCCAGGGCGTGAGCCCGGGCGGAGCGGTCGTCGGTGCAGATCTTGGTGGTAGTA
GCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGACGGGGGAAGC
CCGTCTGATAGCGCTCTCAGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGA
CGTCGGCGGGGGCCCCGGAAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCA
CCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGG