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Detailed information on CNT30632448


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30359977Vigna unguiculataLactuca sativa35.6415.5782.37278forward

Expression of CNT30632448

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLPLSIRSFIHRKRGYLDISISSYFYFYEVSLLQLIKIVVLNDIYM*

>peptide 2 (29 aa)
INKEFQRISSFFLVLSFLLPSEKGIKHWH*

Sequence

>CNT30632448
TAATAAATAAAGAATTTCAAAGAATTTCATCTTTTTTTTTAGTTTTATCTTTTCTCCTACCTTCAGAAAAGGGAATAAAGCATTGGCATTAACGCCCTAA
TTCTAATTTTCTGAAAGGTAACTATCTCGATTTTATATATCATATACAAAAATATATGATAGATTCATTTCTATAGAATCTTGGTAAAAGTTTTTTCTTT
CTTATCTTATAAGTTCTTATAAGTAAAGAGAAAATACTTTCTATCTTTGGGATTTGATACTACACCGCTGCTCAAAATACCAGGGGATCCTTTTTATTAC
ATAAGTGGATTCCTGACTTCTTTATTTATCATGAGATAAGGAAGCAGTTTTTATTATATCGATTGAAAACCGTGTTAATTGATCCTTACGATGCTTCCTT
TATCAATTAGATCTTTTATCCATAGAAAAAGAGGGTATCTAGACATATCGATTTCTTCATATTTTTACTTCTATGAAGTTTCTTTGCTACAGCTGATAAA
AATCGTTGTTTTGAACGATATATATATGTAGAAAGCCTTTCTTATTTATAATTATTTATATTTCTATATTTCTTATATTAAAATTTGTGGATTTGCTTGT
TCTTTTCTTTTTCTTTCTATAGTGGAGATAGTCGCACGTAATGACAGATCACGGCCATATTATTAAAAGCTTGGGGTAAAAATGGGTTTCGTTCGAGCGC
CCGAAAATAATATTCCAAAGCTTTAGTATGTTCTCCGTTACTTGTGTGAATAAGGCCTATGTTATAAAGTATATAACTTC