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Detailed information on CNT30632357


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMQ4|PETD_SOYBN, E-value = 1e-99

BLAST vs NONCODE:
NONSTUT000261, E-value = 3e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618210Vigna unguiculataSesamum indicum17.9250.7293.33105reverse complement
CNT30201894Vigna unguiculataPisum sativum83.6227.5192.86490forward
CNT30708642Vigna unguiculataGlycine max50.3461.8495.93295forward
CNT30309624Vigna unguiculataCamelina sativa71.6799.5391.19420forward
CNT30104480Vigna unguiculataOryza rufipogon64.5174.5688.62378forward

Expression of CNT30632357

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MVVATGRRNGFWNLLTFSKKGTVNNPVGTETIKRTPNNLLGTVRSI*

>peptide 2 (36 aa)
QYLKKGNYSTNQKDGSCYWAAKWILEFINILQKGYC*

>peptide 3 (34 aa)
MDGSRTAKPTLQAIVPRITTGKIYKRSLGHAGSP*

Sequence

>CNT30632357
CAATACCTAAAAAAGGGCAACTACAGTACCAATCAAAAAGATGGTAGTTGCTACTGGGCGGCGAAATGGATTTTGGAATTTATTAACATTCTCCAAAAAG
GGTACTGTTAATAATCCCGTAGGTACCGAAACCATTAAAAGAACGCCCAATAACTTATTGGGCACTGTACGAAGTATTTGAAATACGGGAAAAAAATACC
ATTCAGGTAGTATTTCCAAAGGAGTTGCAAAAGGATCCGCAGGTTCCCCAATCATGGATGGTTCTAGAACCGCTAAGCCTACGTTACAGGCAATAGTACC
TAGAATTACTACTGGAAAAATATATAAAAGATCGTTAGGCCATGCGGGTTCTCCATAATAATTATGACCCATTCCCTTAGCCAATTTAGCTCTTAATACA
GGATCATTCAAGTCAGGTTTTTTTGTTATTGGGATAGGTGAATTCTTATAGATCCATCCTCCAAAAGAACCGGATATGATAATTTTTCATCATCCGGCTC
GAGCACTAATCAAATTTTTAAACTGTATCTATAGAATAAAATAGAAAAAAATGTATGTGTTATCCACACATATATGAAGATTCTAA