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Detailed information on CNT30632346


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524649Vigna unguiculataSetaria italica42.7236.2698.241195forward
CNT30641383Vigna unguiculataNymphaea colorata48.1643.1294.81347forward
CNT30550219Vigna unguiculataIpomoea triloba48.6231.3299.191360forward
CNT30378673Vigna unguiculataArabidopsis thaliana24.5655.0998.25687reverse complement
CNT30283003Vigna unguiculataChenopodium quinoa32.9396.4497.39921reverse complement
CNT30505560Vigna unguiculataNicotiana attenuata48.4861.3398.671356reverse complement
CNT30185187Vigna unguiculataSecale cereale48.8438.6297.511366forward
CNT30299053Vigna unguiculataTriticum aestivum48.8438.1297.141366forward
CNT30401406Vigna unguiculataTriticum turgidum48.8446.6797.511366forward
CNT30569655Vigna unguiculataActinidia chinensis48.738.2598.381362forward
CNT30147391Vigna unguiculataMedicago truncatula88.4997.8398.632475reverse complement
CNT30660235Vigna unguiculataTriticum dicoccoides33.68100.1197.35942reverse complement
CNT30140161Vigna unguiculataLolium perenne48.8440.1397.881366forward
CNT3017954Vigna unguiculataZea mays49.0536.2197.161372forward
CNT30605146Vigna unguiculataGossypium raimondii39.8372.9598.831114reverse complement
CNT30216578Vigna unguiculataKalanchoe fedtschenkoi48.4840.7199.041356forward
CNT30655407Vigna unguiculataRosa chinensis48.6240.6898.91360forward
CNT30628241Vigna unguiculataDaucus carota46.1647.8199.381291reverse complement
CNT30721631Vigna unguiculataTriticum spelta48.8439.3397.361366forward
CNT30346087Vigna unguiculataEragrostis tef28.176.0297.33786forward
CNT30429739Vigna unguiculataPapaver somniferum45.6939.7394.441278forward
CNT30571858Vigna unguiculataVitis vinifera48.6239.2499.411360reverse complement
CNT3056076Vigna unguiculataAmborella trichopoda41.975193.11174forward
CNT3038324Vigna unguiculataCucumis melo46.9869.6797.791314reverse complement
CNT30499372Vigna unguiculataDigitaria exilis46.2338.0497.831293forward
CNT30603680Vigna unguiculataOryza punctata48.8434.6197.81366forward
CNT30557400Vigna unguiculataPanicum hallii23.247.396.76649forward

Expression of CNT30632346

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESCFFKCQ*

>peptide 2 (47 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRKPRPRKGCRPMGTRK*

>peptide 3 (30 aa)
MMSMARGRALNGLGWPHFALPTPGKLRIQA*

Sequence

>CNT30632346
ACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGATTGGGGTTTGAAGAAAAACAAACACGAAGCTTCG
TTTCTCTTTCGAGTATGATAAATCCCTCAGCAGCAAAGTGTTCACTTCTTTTTCGCCAGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCA
GCAAGCCCCTTTCATTGAAAGGGCGCAGTGAACTGTAATTGTGAAAAGGTTGGAAGATCTGGCCAAAGAAGGTGAAAAGAACCCTATTTAGGGAGTGCAA
TAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCTTAGAGCCTTTACTTGAGATTTAGTAAAGCGCACTCACTCTAACGGCGTACCTTTTGC
ATGATGGGTCAGCGAGAAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCCTTTCAGAGGTGGAATCTTCTAGTTCTTCCTATTTGACCCGAAAC
CGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGG
GTGAAAGGCCAACCAAGATCGGAGATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCT
AGGGTGGCCCCATTTCGCCTTACCAACCCCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTAGGGTGCTAAGATCCAAAGTCG
AGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC
AGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGA
AAGTTGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAACACCTGGAGATATCAGAAGTGAGAATGCTGACATGA
GTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAAGCCCCG
ACCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACCATGCCTGTCTGTTGGAGTGAATTGGATGATCGGGCC
GAGGGCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTAAGATGAACCTTGCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCGGTCGCCCTACGC
GACTGGCGCTTCAAAAGGTAGTTGACTTGCTTACTCGTTAGAGTAGGGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGTCTTTTTATA
GTCGCGACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGA
CACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCT
ATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACAC
CTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTTATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAA
TTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGG
AGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTAACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGCGATGACACA
GAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGAAGATTCGGGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTAT
CTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTG
AGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAA
CAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGT
TGTTCGCCGATTCAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCC
AACCCTAGTACGAGAGGACTGGGTTGGGCCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCTGCTAAGTTGGTATGGAAGAACTGCTG
CGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGGACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTAAGCACCGCGAGGTGTGAAGCGA