Detailed information on CNT30632345


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT003033, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712870Vigna unguiculataGlycine max29.5847.2999.75786reverse complement
CNT30157603Vigna unguiculataPistacia vera31.1386.6991.17827reverse complement
CNT30605266Vigna unguiculataGossypium raimondii31.8440.4297.28846reverse complement

Expression of CNT30632345

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

>peptide 2 (30 aa)
MSETAGQSLHHSCRCQTLYIVLPLSRVLCF*

>peptide 3 (68 aa)
MCRFPNQKIGEHPFSRSYGVILPSSFDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFEVFSWKFQPC*

>peptide 4 (39 aa)
ASHLAVLTPLAYRSSVQKPRPRTCIEKDFPRRSSSSIPT*

>peptide 5 (63 aa)
RFTPRGAYTSRLSKFCSKTSSENLYREGFPAAQQFFHTNLAARRCYWHNNRYTIGWPNPVLSY*

Sequence

>CNT30632345
CGCTTCACACCTCGCGGTGCTTACACCTCTCGCCTATCGAAGTTCTGTTCAAAAACCTCGTCCGAGAACTTGTATAGAGAAGGATTTCCCGCGGCGCAGC
AGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCT
CCTCGCAGTTCTCCCTTTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTGAATCGGCGAACAACCG
AACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTCGATAAGAGCTCTTGGGAGTCATCAGCCTGTTAT
CCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGACCAGTCGGTCTCACA
GTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTTAGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCATCCGCCCCAGATAA
ACTACCCACCTCGCAGTGTCCCGCCCCCCCCCGAATCTTCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGAGTGGTCTTTCAGGATTGGTCGTTCTGTG
TCATCGCCTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGC
ATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTGTCAGACTCTATACATCGTGTTACC
ACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTA
CGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCG
GGAGGATCGCCCTCCCAATTCGAAGTTTTTTCCTGGAAGTTTCAACCTTGTTGACTATGACAACAGTCGCGACTATAAAAAGACTCGCGACTATGGCAGG
GCGGTACGCTCTGCTCTCTCGCGACCCCTACTCTAACGAGTAAGCAAGTCAACTACCTTTTGAAGCGCCAGTCGCGTAGGGCGACCGGGCCAGGCCGAGT
CAGAAAGGCTTTGATGACTCAAGCAAGGTTCATCTTAGGGAAAGGAGAGTGAGGGGAAGAGGGGGCAGCCCTCGGCCCGATCATCCAATTCACTCCAACA
GACAGGCATGGTTCTGTAGTCAAAGCAACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGTCGGGGCTTCCTTAGGGACCGATTCACT
CTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTTTCACAGGATTTCTCGTTACTCATGTCAGCATTCTCACTTCTGATAT
CTCCAGGTGTTGTCACCAAAAACCTTCCCCGATTGACAGAACGTCCCGCTACTGACACTTGAAAAAGCAACTTTCAAGGTCTCGTCGCTTCGGTGAATCA
CTTGAGCCCTGATACATTTTCGGTGCCATGGAGCTAGACCAGTGAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCA
TCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCTAAAAG
TCTGTCTGTACAAACGATCTAGGCCTGTATTCGGAGTTTCCCTGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCC
ATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATCTCCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTT
TGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACTAGA
AGATTCCACCTCTGAAAGGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCATTTTCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTG
CGCTTTACTAAATCTCAAGTAAAGGCTCTAAGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTC
ACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTCGCGTAAAAGCGATCAGAATTCGAAC
ACGCCGCGTTTTACTGGGAAGGATCGAACCATGGGAACGAATCTACAGGGCTATCACCTTCTTTGGCCAGATCTTCCAACCTTTTCACAATTACAGTTCA
CTGCGCCCTTTCAATGAAAGGGGCTTGCTGGTTTTTCCATCATCCAATCCACAACAA