Detailed information on CNT30632318


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550233Vigna unguiculataIpomoea triloba52.8667.1294.561892forward
CNT3023562Vigna unguiculataPopulus trichocarpa61.8699.1995.532214reverse complement

Expression of CNT30632318

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCFRGESGSSRAGRGTDWERALRGLFPGRRTVDSELVRTRGIRLFN*

>peptide 2 (66 aa)
MACLGTCVLGHRLVGSHSARLETRTKESDMCASQRVSKLVRRKEADWWIPCGLHRRPTLIICEGFE*

>peptide 3 (65 aa)
MRIVTVAQARAVEMLVETSSLRLWTAVRASWRVSARACSGIGLWAPIRPVLKHGPRSLTCVRVNG*

>peptide 4 (37 aa)
MGPAMCLGRMWNGESRSADRLEALIDADCDGGPSPGC*

>peptide 5 (39 aa)
HIVTPMQMCIEVKVGFPRGIPRGWFKTKLIAKSLVINGG*

>peptide 6 (40 aa)
MNRKLGYGAELRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 7 (46 aa)
MLKKTLLSRPQVRRGYPLSLSISISGGKETNKDSPSNGERTGNSPS*

>peptide 8 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 9 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

>peptide 10 (61 aa)
MRIDRLRCSNCSLEKRPQWRTGPKSPGRGRQRVRARCARTLSHHEALSASRVVWECSPIGR*

Sequence

>CNT30632318
CACATTGTCACCCCAATGCAAATGTGCATTGAGGTGAAAGTTGGCTTCCCGCGAGGCATTCCTCGTGGTTGGTTCAAAACGAAGTTAATCGCGAAGTCCC
TCGTCATAAATGGTGGATGAGTAAATCTCGAGACCAATCGTGACTGGTGCTTTGGGGATGTAATTGGTTGGCTCTGTTGTGTTTTGTGTTCATGTTGAAG
AAGACGCTTTTATCGAGACCTCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTA
ACGGCGAGCGAACCGGGAACAGCCCATCATGAGAATCGATCGCCTTCGGTGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGTGGCGGACCGGGCCCAAG
TCCCCTGGAAGGGGGCGCCAGAGGGTGAGAGCCCGTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCC
CAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGTGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGT
CAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGCCGGCGATGTGTCTCGGTCGGATGTGGAACGGTGAAAGCCGGTCTGCCGATCGACTCGAG
GCATTGATCGATGCGGATTGTGACGGTGGCCCAAGCCCGGGCTGTTGAAATGCTCGTGGAGACGTCATCGTTGCGATTGTGGACGGCAGTGCGCGCCTCA
TGGCGTGTCTCGGCACGTGCGTGCTCGGGCATCGGCTTGTGGGCTCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCA
ACGGGTGAGTAAACTCGTAAGGCGCAAGGAAGCTGATTGGTGGATCCCTTGTGGGTTGCACCGCCGACCGACCCTGATCATATGTGAAGGGTTCGAGTGA
GAGCATACCTGTCGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAAT
CGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGTTCCCTCCGAATTTCCCTCAGGATAGCTGGAGCCCGCGGGCGAGT
TCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCACGGCTGCTCTGTTGAG
CCGTGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCTGGGTTACGGTGCCGAACTGCGCG
CTAACCTAGACCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCG
AATCAACTAGCCCCGAAAATGGATGGCGCTAAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGTACCAAGCCTCGATGAGTAGGAGGGCGCGGCGGTC
GCTGCAAAACCCAGGGCGTGAGCCCGGGCGGAGCGGTCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGG
GGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGACGGGGGAAGCCCGTCTGATAGCGCTCTCAGCGCGTACTCCGAAAGGG
AATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCCCGGAAAGAGTTATCTTTTCTGT
TTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGC
CCTTGAAAATCCGGAGGACCGAGTGCCTCCCACGCCTGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTA
GGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGT
GGACTGCTCGAGCTGCTTTCGCGGCGAGAGCGGGTCGTCGCGTGCCGGTCGGGGGACGGATTGGGAACGGGCCCTTCGGGGCCTCTTCCCCGGGCGTCGA
ACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTGACGCAATGTGATTTCT
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATC
TAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCG
GGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGGAAACAGCGAAAGTGAAATAC
CACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCGCTGCCCCTCTTTTTGGACCCAAGGTCGACTTCGGTCGGTCGATCCGGGCGG
AAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTG
GAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGTCCTTCGGAATTTGAAGCT
AGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATC
ATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACT
GATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCT
ACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGATGCGTGCGCCCGTTGTTTGTTTGCCGACCAGCAGTAGGGGGCCT
CGGCCCCCCAGAGGCACGTGTCGTTGGTGAACCTTGTAAGGAGAATCATCCTTGCGAGACGCCTTGAAGCGCAATTCCTATCGAACGACGGGTAGAATCC
TTTGCAGACGACTTAAATACGCGACAGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGC