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Detailed information on CNT30632297


BLAST search results

BLAST vs Swiss-Prot:
sp|A4GG96|YCF3_PHAVU, E-value = 3e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Vigna unguiculataOryza sativa25.117.9887.84444forward
CNT30618958Vigna unguiculataSesamum indicum42.3613.4486.11749forward
CNT3020650Vigna unguiculataCitrullus lanatus4444.7184.83778forward
CNT30730408Vigna unguiculataCorchorus capsularis25.3494.7187.28448forward
CNT30201080Vigna unguiculataPisum sativum31.9628.3891.33565forward
CNT30556045Vigna unguiculataOryza glaberrima25.1113.687.84444forward
CNT30245953Vigna unguiculataAvena sativa4.8632.3387.2186reverse complement
CNT30598583Vigna unguiculataFraxinus excelsior15.2727.1190270forward
CNT30217417Vigna unguiculataKalanchoe fedtschenkoi21.6681.8489.56383forward
CNT30655373Vigna unguiculataRosa chinensis43.4418.3485.03768forward
CNT30627898Vigna unguiculataDaucus carota42.9924.6984.21760forward
CNT30595954Vigna unguiculataOryza meridionalis24.2632.6787.65429forward
CNT30360010Vigna unguiculataLactuca sativa12.1620.0284.65215forward
CNT30430934Vigna unguiculataPapaver somniferum26.987.389.94477forward
CNT30332506Vigna unguiculataDioscorea rotundata25.1148.7487.16444forward
CNT30149145Vigna unguiculataBrachypodium distachyon25.1124.7285.14444forward
CNT30103542Vigna unguiculataOryza rufipogon20.1450.2186.24356forward
CNT30114189Vigna unguiculataFicus carica43.0419.3286.47761forward

Expression of CNT30632297

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MFSVTCVNKAYVIKYITSIIGINFQSHSLIIIL*

>peptide 2 (33 aa)
MDIDRYKVFVSLIPKRSASFPMLPISTSNLGLT*

>peptide 3 (42 aa)
CQHKTELVNLLEMFLLSFVLSYLSCIGYLSKFHFFSFSLEQL*

Sequence

>CNT30632297
CTGCCAACATAAAACAGAATTAGTGAACTTATTAGAGATGTTTCTATTGAGTTTTGTTCTCTCCTATCTCTCATGTATTGGATATCTTAGTAAATTTCAT
TTCTTTAGTTTTTCACTAGAACAATTATGATCTCGAAGTCAATTCGGGGCAAGTGTTCGAATCTATTATGACATAAGAGTGAGGCGCTCAACGGACCTAT
TTTAATCTTCTAAGACCTTTTTGGGAACTCTGAATGGAAGTTCAATAATTTTTCGTGCAGCCTAATCAAATGTATTCAGATTTTATTCTAATTCTATTCC
TTAGATTTTATTTTTTTTTTTAGATAAAGTATAAGTATGTACTCTATTTCAAATTGAGCAGGCATTAGCATTCATTATTAGGCAATATACCTATATTTTA
TTTCTTTTTTTGAAGGTCTCTTTTCTTAATTTGATTGAATATTAGTTTAAATAACAGAAAAAAGGAGAAAATTATCTACTGTATCCACATCTCGTTTATT
TCTATGAAATACTAGACAAAATCGAACAAAATTAGAAGGGATATATTTAAATTATGTGATTGGTCGTTCCTATAGAAATGATTTTTGAATTTGATAGGGA
CAAGAAACAAGAATTTATAACAATATATATTTATCTATCTATATCTTTATATAGATAGATAAATATATAAGAAAAAAAAGAAACAGAGTGTTCTTATTCA
AAACGCCCTGTGATCTTCAACCAATTCTGTGCTGCAATATAATTACCGGGGGTGAGAGCTATAGCTTGTTTCCAATATTCAGCGGCTTGATTAAACCAAG
ACTCCGCAACTTCTGAGTCTCCCTGCCGAATGGCCTGTTCTCCTCGGTCGAAATAGATCACGGCCATATTATTAAAAGCTTGGGGTAAAAATGGGTTTCG
TTCGAGCGCCCGAAAATAATATTCCAAAGCTTTAGTATGTTCTCCGTTACTTGTGTGAATAAGGCCTATGTTATAAAGTATATAACTTCGATCATAGGGA
TCAATTTCCAGTCGCATAGCCTCATAATAATTCTGTAAAGCTTCTGCATAATTTCCTTCAGATTGAGCTGACATCCGTTACGGTCGTCATTCGGTTCAAA
GAATCTCCGCTCCAGAACTGTACGTGAGATTTTCATCTCATACGGCTCCCCCCTTATGTGTGTAATGAGAAAAATCCATCAAATCAAAAAATATTCCAGT
ATTCTCATTCTCAACTGAACAGAGCTAGTGTTTTTACAATAAATCTCTAGCCAACCTTCCTGTCAAAAATTATTTCTTAACATTAAGTATGTAGGTACTT
GATAAAAAAAAATAAGAACTTCAACAATTTCTTTGTCCTCTACGCTGCTTAATTTCCTGGAATTAGTCACCTCAATAATCTTCGATGGTTCTATGGGTAT
CCAAAATATGAACGAGATGGATATTTATTGTCCCAACCATTCCTGTTAGTCCCAATCTCGATAAGCCATGGATATAGATAGATACAAAGTTTTCGTGTCC
TTGATTCCCAAGCGTAGTGCTTCTTTCCCAATGTTGCCTATCAGTACTAGTAATTTGGGGTTGACCTAACCCCATAAGTATAGGTATAACCTTTCGCTTA
ATACTAGAAACCTAAAATTCAAGCATATAAGGCTTCATTAATCGAGGATACACGACAGAAGGAATTAATCCTTTTATTTACAAATTTCACCTTCAACACG
CGTGGGGTTTTTCCATTCCATTTTTTTTTGACCGAAATCGGTCAAAAAAAATGGAATCAAATCACACC