Detailed information on CNT30632293


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020382Vigna unguiculataCitrullus lanatus18.220.6492.23103forward
CNT30198677Vigna unguiculataPisum sativum17.4928.2194.9599forward
CNT30708208Vigna unguiculataGlycine max24.5610.0489.93139reverse complement
CNT30208139Vigna unguiculataHelianthus annuus18.0230.0991.18102forward
CNT30688963Vigna unguiculataTriticum urartu17.4924.3288.8999forward
CNT30174589Vigna unguiculataVigna angularis42.5850.5295.02241reverse complement

Expression of CNT30632293

Peptides detected in this lncRNA

>peptide 1 (71 aa)
ISNKSFSSLVNLPRAIVIAILLFNYFNHFPTPHRAFSEMGRTLIIYLYSFLSLYIYRIYKYTFPCFLIGFE*

>peptide 2 (43 aa)
MTPKSDRNFFFRTVQETNDPLFHFLYLADLQTYFSPFIKETYS*

Sequence

>CNT30632293
AATATCAAATAAATCATTTTCATCTTTGGTAAATTTACCAAGAGCTATAGTCATAGCGATCCTCCTATTCAACTACTTCAACCATTTCCCAACACCTCAT
AGAGCATTTTCAGAGATGGGACGGACCTTGATCATTTATCTCTATTCATTTCTCTCTCTATATATATATAGAATATATAAGTATACTTTCCCTTGTTTTC
TAATCGGTTTCGAATAAAAAATCATTTATGGGTCTATTGATATCTAGGGCAAATCCATGAACTCGATGTGGTTATTCCTTATCTATTCTTAAAAATCTTC
CAAGTCATCAATCATAAAATCTGCTATGACTCCAAAATCCGATAGAAATTTTTTTTTCAGAACTGTTCAAGAAACAAATGATCCCCTGTTTCACTTCTTA
TACCTAGCGGATCTTCAGACATATTTCTCTCCTTTCATCAAAGAAACTTATTCTTGAAGTTTGGTTGTGAATTGACTTCTATTTTGTCTAGGAAACTACT
GTAGGATCATAGGTTTTCTAAATTTCTATTTCATTTACAGTTTTTTCTTTAGTATTTCATTTTTTT