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Detailed information on CNT30632292


BLAST search results

BLAST vs Swiss-Prot:
sp|A4GGB1|ATPF_PHAVU, E-value = 8e-55

BLAST vs NONCODE:
NONGMAT000308, E-value = 2e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535895Vigna unguiculataEucalyptus grandis5.5329.9687.35166forward
CNT30271983Vigna unguiculataChenopodium quinoa14.436.9285.42432forward
CNT30202122Vigna unguiculataPisum sativum1.6321.1289.849reverse complement
CNT30506790Vigna unguiculataNicotiana attenuata5.4726.9790.24164reverse complement
CNT30709297Vigna unguiculataGlycine max4.8341.6782.76145forward
CNT30179302Vigna unguiculataSecale cereale6.2729.1987.23188forward
CNT30304558Vigna unguiculataTriticum aestivum420.6585.83120forward
CNT30222903Vigna unguiculataHordeum vulgare442.1186.67120forward
CNT30567675Vigna unguiculataActinidia chinensis7.0723.4382.55212forward
CNT3086153Vigna unguiculataVigna radiata7.2798.6497.25218reverse complement
CNT30553466Vigna unguiculataOryza glaberrima4.3725.188.55131forward
CNT30172627Vigna unguiculataTrifolium pratense3.855.6186.84114reverse complement
CNT30145240Vigna unguiculataMedicago truncatula4.825.990.28144forward
CNT30660677Vigna unguiculataTriticum dicoccoides12.528.1180.8375forward
CNT30598585Vigna unguiculataFraxinus excelsior11.7341.2785.8352forward
CNT3017908Vigna unguiculataZea mays15.626.0380.56468forward
CNT30205079Vigna unguiculataHelianthus annuus12.5352.0185.37376forward
CNT30367017Vigna unguiculataSorghum bicolor4.9738.2186.58149reverse complement
CNT30621081Vigna unguiculataCajanus cajan13.0737.5592.86392forward
CNT30409854Vigna unguiculataPapaver somniferum13.0759.1384.18392forward
CNT30551824Vigna unguiculataOryza brachyantha4.454.182.58132forward

Expression of CNT30632292

Peptides detected in this lncRNA

>peptide 1 (37 aa)
KYLKFIFYKKKMMPILYCIIESLISYFFISSSQTCQY*

>peptide 2 (36 aa)
MPILALTVRKCNSLFKQLFRVPRAPCKACCKTRCRT*

>peptide 3 (47 aa)
MAFSCNSSEFRIVLQIFCFRLSNKSRNESRLSFHPFQNVYDLFPNQT*

>peptide 4 (53 aa)
MKVDSLSIHFKMSMISSRTKHESFDSFGSHTQLLIGNLPIFYVMSLSSLLYSK*

>peptide 5 (32 aa)
MLWFFKIFLNLFKKENEFRSNSRDSAHFLNSN*

>peptide 6 (32 aa)
MNSEVIRGILHIFLILTKLKSAVWLNPIYSLK*

>peptide 7 (32 aa)
MSTKLFFYSNPKTSFEFIHRSSIDYASYKGEV*

Sequence

>CNT30632292
GAAAATATCTTAAATTTATTTTTTATAAGAAAAAAATGATGCCTATACTCTATTGTATAATAGAAAGCCTAATCAGTTATTTTTTTATTTCATCATCCCA
AACATGCCAATATTAGCACTAACAGTACGTAAATGTAACTCGTTGTTCAAGCAACTATTTAGAGTTCCTAGAGCTCCCTGTAAGGCTTGTTGTAAAACCC
GCTGTCGAACTTGATTAATAACTCTTTGTTGTTCAAAATCAATAGCTTCGTTTTTGTAATTTTCTAATTGTTCCAAAGTCGTATAAATTGAATTAATTAA
ATTCAATTTTTCTCGTTTGATCTCAGAATAGCCATTCACCCGAAACAGATCTGCTTCTGTTTCAACTTTCCTTAAGCGGGCCTGGGCTTTTTCGAGCTGT
TCAATGGCGTTTTCCTGTAATTCTTCTGAGTTTCGAATAGTTCTCCAGATTTTCTGTTTTCGATTATCTAATAAATCACGTAATGAAAGTAGACTCTCTT
TCCATCCATTTCAAAATGTCTATGATCTCTTCCCGAACCAAACATGAATCTTTCGATTCATTTGGCTCTCACACTCAATTACTTATCGGAAATTTACCAA
TTTTTTATGTAATGAGCCTATCCTCTCTTCTCTATTCAAAGTGAAAACAATTACCAATATAAGACTAGAATATTCGGAGGACTCTTTTGACCAAACAAAT
ATATGTCAACAAAGTTGTTTTTTTATTCAAATCCAAAGACTTCTTTTGAATTTATACATAGGTCATCCATCGATTACGCATCGTACAAAGGGGAGGTTTA
AATTCACCCGTTTTTTATTTCTCGCCATAAATAGGATTCAAGCCATTTTTTTTATCGACATGAGTGTTTTATATCGAAAAAAAATCGAATAATTTTTTTG
AAACCGTTTCCTTTCTGTATTAATATAGCGGTAGAAAGAGTACTACACTGCGTATAGACTTCAAACTCTTTTTAACCATGGTAATAGTCCAAAATTTTTG
GTAAATAGAGAATCAAAGTGGATTACCAATAAAGCGCGAAATGCTATGGTTCTTTAAGATTTTTCTTAATTTATTCAAAAAAGAAAATGAATTCAGAAGT
AATTCGCGGGATTCTGCACATTTTCTTAATTCTAACTAAACTAAAAAGTGCAGTTTGGTTAAATCCAATTTATTCTTTGAAATAAACAACTCGCACACAC
TCCCTTTCCAAAAAAAACCAGTAGACCTAACACTACACTAAGATTTATTGGATTTGTTGCTAAAATATCGGTATTAAACACGAAACTTCCGGCGGATGGC
CAGGAGCCCAAACAAAGGAAAGAATCGGTTATATTTTTCATATGATCTCATCTCCTCTTATGAATAGACTAATTATCTTTCTAATATTCCTATTAGATAG
ATAATATAATAATCTAATTGGAATATATAATTATAGAATTTGATATAATTTGGATTGGTCAATCAATTGGAAGATTCCCTAAAAGAATGATACTTCTTAG
AATTAGATACCAGTTCTTTTATCAATTGCAAAATCTATCTAGTTTGAACACTTTCAAAAAATTATCTTAAAAGAAATAAAAGAGGGGTTCATTGGACTAA
ACAAAAAGAAGAAAGAGGGTGAATAAGTATGTGAATACCTTTCAATTAGTCCTTCTCCTGTGTTCTTATCCGAACAGATAAAGAATTGTAGGAGTGAATT
ATTAATATAATTCGAAAAAGGAAGTCCACATATGTATTTTTATCTTTTTAGGATTAAACAAAAGGATTAGCAAATAAAAGTGCTAATGCTACAACCAGCC
CGTAAATTGTTAAAGCTTCCATAAAAGCCAGACTAAGTAATAAAGTACCCCGTATTTTTCCCTCTGCCTCTGGTTGTCGTGCAATCCCCTCTACAGCTTG
CCCTGCGGCAGTGCCTTGACCAACCCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCGGCAGAAATAATTGGATTCATG
AGAATTTCCTCGTAACCTACATATAAAAGAAAGAAATAGTTAATGATATAATCGACTAATAAATTCTGACTTCATTTTTCAATTACCAAGACTTTTTCAG
TTAAAGTAATTAATAAAAATAAGAATTAAAAATTGAAAATAATAGTTATTAAACGAATTACTTCGAGATTTCTTTTTTCGTCTCGAACTACATAGTTTTG
GGGGTGAATCTGTATAATCTTTGTTCTTCTCTTACCTTAATTTTGGAATCATTCTTTGAATTCTTCGTTTTTTTATACAATTTCTTTAGTTTTTTAATTT
TCAATTCACAATTAGAGCTGAAACGCAAGGACTTTGCTTTTCTATCCCTATAGAAATTGACAGTAATAGCGAGGCCTTTTTTATATAGAAAAGATTAGTT
ATTTCAGATATATGGTTAGTTCATATAAAACTAGTTCATCTATAATATCATATCACATATACATAGGTTTCTTCTATGCTGTAAACTAATTTTCTTTGTG
TTTTAGATTCAATCGAAATTGAAATTCATTCTTTGAAACCTAAAAAACCTTGACTGATCCCCTCACTTCTATTTTTTTTATCATGTTTTTTTTTAAGCTC
CCCTTCCCTCTTTTCTTATTCTCTTATCCCATATGGATACAATCAATCTAAATAAATTCATTCGATTTCATTAATGTTTCAAAGAAATATAGGAAATTGG
GTGATCTAAATGTTTTTAATTATCTTTTGATCAATTGTTGAATTAAATGTGAATCAAACGAGAATCTACTAACATTCTATATAGTATCTTTTTATCACAC
ATTGTAAACGTAAATATCATACAGAATTCTAATTCTAGCTATTCATTTTTTTTGAATATCCAAACTAATATATACTAATCGAATAGATCTATCTATATCT
ATCTATATATCTATAGATAGATGTTTATTTTGTAGATTCTATTGAGCCACAATATATGTGTGGCAAGCTAAACAAAAAAGACTATTTTTGAGAAAACTAG