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Detailed information on CNT30632291


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30504398Vigna unguiculataNicotiana attenuata21.6813.4383.82204forward
CNT3088944Vigna unguiculataVigna radiata53.8828.9493.89507forward
CNT30597766Vigna unguiculataFraxinus excelsior14.5628.3187.59137forward
CNT30607170Vigna unguiculataGossypium raimondii2228.6383.09207forward
CNT30655376Vigna unguiculataRosa chinensis20.417.7883.85192forward
CNT30204699Vigna unguiculataHelianthus annuus15.9452.8284150reverse complement
CNT30644762Vigna unguiculataCannabis sativa9.6721.2686.8191forward

Expression of CNT30632291

Peptides detected in this lncRNA

>peptide 1 (36 aa)
PRRVYKQRQFFILFLYAQIYHNTNKLIRYFTINILT*

>peptide 2 (31 aa)
MIEVVIVEILPIGFFYTEPGYLILLVQLSQP*

>peptide 3 (76 aa)
MHLLMHTVHQKLYKQKRNQCVDFNLSLFLMDFFELKKKKNILNLVNYLLIDVLLSSRSKPNHNVIFLFLNGLFQFF*

Sequence

>CNT30632291
CCCCCCGGAGAGTTTATAAACAGAGACAATTCTTTATTCTCTTTCTCTATGCTCAGATATATCATAATACTAATAAGTTGATTCGATATTTCACTATCAA
CATCTTGACCTAAAAAAAGTAATCTTTCTCGATAAAGTCGATTGATTAGGATTCCATTTTTTCCTTAAAAGCCGTACATGCACCTTTTGATGCATACAGT
TCATCAAAAATTATATAAGCAAAAAAGGAATCAATGTGTCGATTTTAATCTTTCTCTTTTTCTAATGGATTTCTTCGAACTAAAAAAAAAGAAGAATATA
CTTAATTTAGTGAACTATCTTCTCATTGATGTATTGCTTTCATCGAGATCGAAGCCGAATCACAATGTAATTTTCTTGTTTCTGAATGGACTTTTTCAAT
TCTTTTAGGTTTCTTTTCTACTCTGAGTAAAGATCTGCCCGATTTGGATTTGCACATATAGAACAAATAGTCCAAAACTATGTATTTTTGTTAGAACTTC
TTCCTTTTCTGAATTTATTAATGTTTTTTGTAAAATACAATATATAGATATGATAGAAGTAGTGATCGTAGAAATATTACCAATTGGTTTTTTCTACACA
GAGCCTGGGTACTTGATTTTATTGGTCCAATTAAGCCAACCATAAATTATTCATAATTTCGAGTAATAATCTGGAAATTTTATCTAAAAATGAAAAAATC
GATAGAATAGTACTTCATTACACTTCACGCTCCCCATTTTTTTATCTTTATGATTTCATCATTCTCTTTTGGGGGTGAAAGCGGGGATATCTCGATCGGG
GGAGAAAACGGGTAAATCCCATATAACCTACTATATCTGACAAGTCGCACTATATATCAACCCAAGATGCATCTTTATCCCCGGGGGTTCGAAAGGGTAC
TCTTGGAACACCAATGGGCATAAAATGGACAAATAATAAAG