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Detailed information on CNT30632211


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ATM4|PIP27_MAIZE, E-value = 1e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375565Vigna unguiculataArabidopsis thaliana17.4321.4692.4553forward
CNT30282953Vigna unguiculataChenopodium quinoa20.0716.1888.5261reverse complement
CNT30728842Vigna unguiculataCorchorus capsularis29.6125.9484.4490forward
CNT3070603Vigna unguiculataQuercus suber37.53088.6114forward
CNT30525480Vigna unguiculataPhaseolus vulgaris26.323.7486.2580forward
CNT30710681Vigna unguiculataGlycine max59.2124.8693.33180forward
CNT3044723Vigna unguiculataPrunus dulcis41.4513.887.3126forward
CNT3096137Vigna unguiculataSolanum tuberosum27.6311.3583.3384forward
CNT30568278Vigna unguiculataActinidia chinensis36.8422.7282.14112forward
CNT3084566Vigna unguiculataVigna radiata26.9713.9285.3782forward
CNT30145515Vigna unguiculataMedicago truncatula33.5541.6391.18102forward
CNT30653715Vigna unguiculataRosa chinensis33.8817.6784.47103forward
CNT30213185Vigna unguiculataHelianthus annuus31.5817.3683.3396forward
CNT30570969Vigna unguiculataVitis vinifera20.7222.9185.7163forward
CNT30704435Vigna unguiculataPrunus avium33.5515.4388.24102forward
CNT30120512Vigna unguiculataCitrus clementina36.5137.1284.68111forward
CNT30724415Vigna unguiculataLupinus angustifolius72.3738.2685.45220forward

Expression of CNT30632211

Peptides detected in this lncRNA

>peptide 1 (87 aa)
AYRNIGVSSVLLRVSGREDSVDKNEGTDNLSTQSSALVVAISNRVSTASIPVVVRFLEPLRQSSATDSTSTLCYHVQQRPYQGHLAS*

Sequence

>CNT30632211
GCTTACAGGAATATAGGAGTCTCTAGCGTTCTTCTTAGGGTCAGTGGCAGAGAAGACAGTGTAGACAAGAACGAAGGTACCGATAATCTCAGCACCCAAA
GCAGTGCCCTTGTTGTAGCCATCAGCAACAGAGTTAGCACCGCCTCCATACCTGTTGTAGTACGCTTTCTGGAACCCCTTCGCCAGTCCAGTGCCACAGA
TAGCACCAGCACACTGTGCTACCATGTACAACAACGCCCTTATCAAGGACACCTTGCGTCCTAGGAACAACCCGAATGTCACAGCTGGGTTTATGTGTCC
TCCT